RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 TESPA1A2RU30 521 aaPredicted RBP13.54□□□□□ -0.24
HLA-F-221ENST00000444621 USP2O75604 605 aaPredicted RBP13.54□□□□□ -0.24
HLA-F-221ENST00000444621 BAG3O95817 575 aa13.54□□□□□ -0.24
HLA-F-221ENST00000444621 IFIT2P09913 472 aaKnown RBP13.54□□□□□ -0.24
HLA-F-221ENST00000444621 CACNB3P54284 484 aa13.54□□□□□ -0.24
HLA-F-221ENST00000444621 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
HLA-F-221ENST00000444621 AACSQ86V21 672 aa13.54□□□□□ -0.24
HLA-F-221ENST00000444621 FAM151AQ8WW52 585 aa13.54□□□□□ -0.24
HLA-F-221ENST00000444621 ZNF512BQ96KM6 892 aaPredicted RBP13.54□□□□□ -0.24
HLA-F-221ENST00000444621 DBNDD2Q9BQY9 259 aa13.54□□□□□ -0.24
HLA-F-221ENST00000444621 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
HLA-F-221ENST00000444621 AK9Q5TCS8 1911 aa13.54□□□□□ -0.24
HLA-F-221ENST00000444621 MYH2Q9UKX2 1941 aa13.54□□□□□ -0.24
HLA-F-221ENST00000444621 APBB1O00213 710 aa13.53□□□□□ -0.24
HLA-F-221ENST00000444621 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
HLA-F-221ENST00000444621 MECOMQ03112 1051 aa13.53□□□□□ -0.24
HLA-F-221ENST00000444621 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-221ENST00000444621 SLC17A8Q8NDX2 589 aa13.53□□□□□ -0.24
HLA-F-221ENST00000444621 RHPN1Q8TCX5 695 aa13.53□□□□□ -0.24
HLA-F-221ENST00000444621 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-221ENST00000444621 BCL11AQ9H165 835 aa13.53□□□□□ -0.24
HLA-F-221ENST00000444621 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
HLA-F-221ENST00000444621 PLCG2P16885 1265 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 MCAMP43121 646 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 TCP10Q12799 353 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 ARHGEF6Q15052 776 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 NAA16Q6N069 864 aaPredicted RBP13.52□□□□□ -0.25
HLA-F-221ENST00000444621 SH3TC2Q8TF17 1288 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 SNRKQ9NRH2 765 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 MROH7-TTC4A0A0A0MT08 1334 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 AOX1Q06278 1338 aa13.52□□□□□ -0.25
HLA-F-221ENST00000444621 GAKO14976 1311 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 ENTPD3O75355 529 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 WDHD1O75717 1129 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-221ENST00000444621 BTDP43251 543 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 TTF1Q15361 905 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-221ENST00000444621 C20orf194Q5TEA3 1177 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 TBC1D9Q6ZT07 1266 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 NSUN4Q96CB9 384 aaKnown RBP13.51□□□□□ -0.25
HLA-F-221ENST00000444621 EAF2Q96CJ1 260 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-221ENST00000444621 OPTNQ96CV9 577 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 ELP3Q9H9T3 547 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-221ENST00000444621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-221ENST00000444621 COL6A3P12111 3177 aa13.51□□□□□ -0.25
HLA-F-221ENST00000444621 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-221ENST00000444621 GPR75-ASB3A0A0A6YYF3 556 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 MAP3K12Q12852 859 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 TAF1CQ15572 869 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-221ENST00000444621 TMED8Q6PL24 325 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-221ENST00000444621 CERS3Q8IU89 383 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 BRI3BPQ8WY22 251 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 DPF3Q92784 378 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 IDI2Q9BXS1 227 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 ZFYVE28Q9HCC9 887 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 IL1RAPL2Q9NP60 686 aa13.5□□□□□ -0.25
HLA-F-221ENST00000444621 DBNLQ9UJU6 430 aaKnown RBP13.5□□□□□ -0.25
HLA-F-221ENST00000444621 RGS3P49796 1198 aa13.49□□□□□ -0.25
HLA-F-221ENST00000444621 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
HLA-F-221ENST00000444621 PICALMQ13492 652 aa13.49□□□□□ -0.25
HLA-F-221ENST00000444621 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
HLA-F-221ENST00000444621 MIGA2Q7L4E1 593 aa13.49□□□□□ -0.25
HLA-F-221ENST00000444621 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
HLA-F-221ENST00000444621 WRNIP1Q96S55 665 aa13.49□□□□□ -0.25
HLA-F-221ENST00000444621 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
HLA-F-221ENST00000444621 RANBP2P49792 3224 aaKnown RBP13.49□□□□□ -0.25
HLA-F-221ENST00000444621 CCL15-CCL14A0A0B4J2E2 113 aa13.48□□□□□ -0.25
HLA-F-221ENST00000444621 IDH1O75874 414 aaKnown RBP13.48□□□□□ -0.25
HLA-F-221ENST00000444621 CYP2E1P05181 493 aaPredicted RBP13.48□□□□□ -0.25
HLA-F-221ENST00000444621 ZAP70P43403 619 aa13.48□□□□□ -0.25
HLA-F-221ENST00000444621 GTF2A2P52657 109 aa13.48□□□□□ -0.25
HLA-F-221ENST00000444621 CCL15Q16663 113 aa13.48□□□□□ -0.25
HLA-F-221ENST00000444621 ERO1BQ86YB8 467 aa13.48□□□□□ -0.25
HLA-F-221ENST00000444621 TEX11Q8IYF3 940 aa13.48□□□□□ -0.25
HLA-F-221ENST00000444621 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
HLA-F-221ENST00000444621 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
HLA-F-221ENST00000444621 NFIAQ12857 509 aa13.47□□□□□ -0.25
HLA-F-221ENST00000444621 VGLL4Q14135 290 aa13.47□□□□□ -0.25
HLA-F-221ENST00000444621 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
HLA-F-221ENST00000444621 SIRT2Q8IXJ6 389 aa13.47□□□□□ -0.25
HLA-F-221ENST00000444621 FAM43AQ8N2R8 423 aa13.47□□□□□ -0.25
HLA-F-221ENST00000444621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.257e-9■■□□□ 12.7
HLA-F-221ENST00000444621 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
HLA-F-221ENST00000444621 SHISA4Q96DD7 197 aa13.47□□□□□ -0.25
HLA-F-221ENST00000444621 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
HLA-F-221ENST00000444621 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
HLA-F-221ENST00000444621 TLR7Q9NYK1 1049 aaKnown RBP13.47□□□□□ -0.25
HLA-F-221ENST00000444621 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
HLA-F-221ENST00000444621 A0A0C4DFX4 3053 aa13.46□□□□□ -0.25
HLA-F-221ENST00000444621 CYP7A1P22680 504 aa13.46□□□□□ -0.25
HLA-F-221ENST00000444621 AAMPQ13685 434 aa13.46□□□□□ -0.25
HLA-F-221ENST00000444621 MTFR1Q15390 333 aa13.46□□□□□ -0.25
HLA-F-221ENST00000444621 PRO3102Q9H379 93 aa13.46□□□□□ -0.25
HLA-F-221ENST00000444621 PICK1Q9NRD5 415 aa13.46□□□□□ -0.25
HLA-F-221ENST00000444621 AATFQ9NY61 560 aaKnown RBP eCLIP13.46□□□□□ -0.25
HLA-F-221ENST00000444621 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-221ENST00000444621 CETPP11597 493 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms