RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CST9Q5W186 159 aa16.95■□□□□ 0.3
SSBP3-208ENST00000444533 CSRNP1Q96S65 589 aa16.95■□□□□ 0.3
SSBP3-208ENST00000444533 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
SSBP3-208ENST00000444533 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
SSBP3-208ENST00000444533 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 GNAT2P19087 354 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 MFAP1P55081 439 aaKnown RBP16.94■□□□□ 0.3
SSBP3-208ENST00000444533 HUNKP57058 714 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 PRKG1Q13976 671 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 DLK2Q6UY11 383 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 MAPKAPK5Q8IW41 473 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 OSBPL5Q9H0X9 879 aaPredicted RBP16.94■□□□□ 0.3
SSBP3-208ENST00000444533 DIAPH3Q9NSV4 1193 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
SSBP3-208ENST00000444533 TLL2Q9Y6L7 1015 aa16.94■□□□□ 0.3
SSBP3-208ENST00000444533 ECE1P42892 770 aa16.93■□□□□ 0.3
SSBP3-208ENST00000444533 DEFB115Q30KQ5 88 aa16.93■□□□□ 0.3
SSBP3-208ENST00000444533 SAPCD2Q86UD0 394 aa16.93■□□□□ 0.3
SSBP3-208ENST00000444533 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
SSBP3-208ENST00000444533 ARMT1Q9H993 441 aa16.93■□□□□ 0.3
SSBP3-208ENST00000444533 ATP8A2Q9NTI2 1148 aa16.93■□□□□ 0.3
SSBP3-208ENST00000444533 MYH7P12883 1935 aa16.93■□□□□ 0.3
SSBP3-208ENST00000444533 FLT1P17948 1338 aa16.93■□□□□ 0.3
SSBP3-208ENST00000444533 AK9Q5TCS8 1911 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 UNCXA6NJT0 531 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 APPP05067 770 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 POLR3DP05423 398 aaPredicted RBP16.92■□□□□ 0.3
SSBP3-208ENST00000444533 TTC6Q86TZ1 520 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 LCORLQ8N3X6 602 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 CRACR2BQ8N4Y2 399 aaPredicted RBP16.92■□□□□ 0.3
SSBP3-208ENST00000444533 HHIPL1Q96JK4 782 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 TEPSINQ96N21 525 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 ZNF341Q9BYN7 854 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 DDX4Q9NQI0 724 aaKnown RBP16.92■□□□□ 0.3
SSBP3-208ENST00000444533 HELLSQ9NRZ9 838 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 PI4KBQ9UBF8 816 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 CSADQ9Y600 493 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 PAPPA2Q9BXP8 1791 aa16.92■□□□□ 0.3
SSBP3-208ENST00000444533 ZMYM1Q5SVZ6 1142 aa16.91■□□□□ 0.3
SSBP3-208ENST00000444533 RUFY2Q8WXA3 655 aa16.91■□□□□ 0.3
SSBP3-208ENST00000444533 PUS7LQ9H0K6 701 aaKnown RBP16.91■□□□□ 0.3
SSBP3-208ENST00000444533 COL2A1P02458 1487 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-208ENST00000444533 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 GPAA1O43292 621 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 SDSP20132 328 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 ZNF157P51786 506 aaPredicted RBP16.9■□□□□ 0.3
SSBP3-208ENST00000444533 MCMDC2Q4G0Z9 681 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 MIGA2Q7L4E1 593 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 ANKRD13AQ8IZ07 590 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 OSBP2Q969R2 916 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 CCDC102AQ96A19 550 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
SSBP3-208ENST00000444533 MCM9Q9NXL9 1143 aa16.9■□□□□ 0.3
SSBP3-208ENST00000444533 SAP30BPQ9UHR5 308 aaKnown RBP16.9■□□□□ 0.3
SSBP3-208ENST00000444533 HERC5Q9UII4 1024 aaKnown RBP16.9■□□□□ 0.3
SSBP3-208ENST00000444533 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.3
SSBP3-208ENST00000444533 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-208ENST00000444533 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 GRM1Q13255 1194 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 MAP3K11Q16584 847 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 SLFNL1Q499Z3 407 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 RGMBQ6NW40 437 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 FOXP4Q8IVH2 680 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-208ENST00000444533 ZFPM1Q8IX07 1006 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 SLC10A4Q96EP9 437 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 STRBPQ96SI9 672 aaKnown RBP16.89■□□□□ 0.29
SSBP3-208ENST00000444533 MKRN1Q9UHC7 482 aaKnown RBP16.89■□□□□ 0.29
SSBP3-208ENST00000444533 PALD1Q9ULE6 856 aa16.89■□□□□ 0.29
SSBP3-208ENST00000444533 USP2O75604 605 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-208ENST00000444533 TDO2P48775 406 aa16.88■□□□□ 0.29
SSBP3-208ENST00000444533 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
SSBP3-208ENST00000444533 HTRA3P83110 453 aa16.88■□□□□ 0.29
SSBP3-208ENST00000444533 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
SSBP3-208ENST00000444533 DCP1AQ9NPI6 582 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-208ENST00000444533 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-208ENST00000444533 PATL2C9JE40 543 aaKnown RBP16.87■□□□□ 0.29
SSBP3-208ENST00000444533 M0R2C6 588 aa16.87■□□□□ 0.29
SSBP3-208ENST00000444533 TBC1D12O60347 775 aa16.87■□□□□ 0.29
SSBP3-208ENST00000444533 CHGBP05060 677 aa16.87■□□□□ 0.29
SSBP3-208ENST00000444533 GSPT1P15170 499 aaKnown RBP16.87■□□□□ 0.29
SSBP3-208ENST00000444533 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
SSBP3-208ENST00000444533 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
SSBP3-208ENST00000444533 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
SSBP3-208ENST00000444533 KLRG1Q96E93 195 aa16.87■□□□□ 0.29
SSBP3-208ENST00000444533 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
SSBP3-208ENST00000444533 ARPP21Q9UBL0 812 aaPredicted RBP16.87■□□□□ 0.29
SSBP3-208ENST00000444533 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
SSBP3-208ENST00000444533 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-208ENST00000444533 BMP2KLQ5H9B9 411 aa16.86■□□□□ 0.29
SSBP3-208ENST00000444533 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
SSBP3-208ENST00000444533 CAPNS2Q96L46 248 aa16.86■□□□□ 0.29
SSBP3-208ENST00000444533 NAPBQ9H115 298 aa16.86■□□□□ 0.29
SSBP3-208ENST00000444533 SERPINB13Q9UIV8 391 aa16.86■□□□□ 0.29
SSBP3-208ENST00000444533 PRKAB2O43741 272 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms