RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 CAVIN4Q5BKX8 364 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 WWC1Q8IX03 1113 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 NBPF3Q9H094 633 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 AFG3L2Q9Y4W6 797 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 ZHX2Q9Y6X8 837 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
COMMD1-203ENST00000444166 RPTORQ8N122 1335 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 DDX60LQ5H9U9 1706 aaKnown RBP12.72□□□□□ -0.37
COMMD1-203ENST00000444166 VAMP4O75379 141 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 PDE8BO95263 885 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 HMGCRP04035 888 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 PTPRAP18433 802 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 DDX10Q13206 875 aaKnown RBP12.72□□□□□ -0.37
COMMD1-203ENST00000444166 LRRC24Q50LG9 513 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 SCYL3Q8IZE3 742 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 COA7Q96BR5 231 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 GUCD1Q96NT3 240 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
COMMD1-203ENST00000444166 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 ALDH1L1O75891 902 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 MAP3K10Q02779 954 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 FAM110CQ1W6H9 321 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 RABL6Q3YEC7 729 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-203ENST00000444166 FAM109BQ6ICB4 259 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-203ENST00000444166 GADL1Q6ZQY3 521 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 SMCR8Q8TEV9 937 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-203ENST00000444166 UBE2OQ9C0C9 1292 aaKnown RBP12.71□□□□□ -0.37
COMMD1-203ENST00000444166 C11orf49Q9H6J7 331 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 PRKRIP1Q9H875 184 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-203ENST00000444166 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-203ENST00000444166 OGDHLQ9ULD0 1010 aa12.71□□□□□ -0.37
COMMD1-203ENST00000444166 RFX7Q2KHR2 1363 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 UTYO14607 1347 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 PFASO15067 1338 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 DOCK2Q92608 1830 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 FGFR2P21802 821 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 TRIM32Q13049 653 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 METTL24Q5JXM2 366 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 ANKRD13CQ8N6S4 541 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 WDR66Q8TBY9 1149 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 PICK1Q9NRD5 415 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 GJD2Q9UKL4 321 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 AGTPBP1Q9UPW5 1226 aa12.7□□□□□ -0.38
COMMD1-203ENST00000444166 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
COMMD1-203ENST00000444166 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
COMMD1-203ENST00000444166 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
COMMD1-203ENST00000444166 HMX1Q9NP08 348 aaPredicted RBP12.69□□□□□ -0.38
COMMD1-203ENST00000444166 DOCK1Q14185 1865 aa12.68□□□□□ -0.38
COMMD1-203ENST00000444166 MUC3AQ02505 3323 aa12.68□□□□□ -0.38
COMMD1-203ENST00000444166 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
COMMD1-203ENST00000444166 COL6A1P12109 1028 aa12.68□□□□□ -0.38
COMMD1-203ENST00000444166 PRDX5P30044 214 aa12.68□□□□□ -0.38
COMMD1-203ENST00000444166 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
COMMD1-203ENST00000444166 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
COMMD1-203ENST00000444166 IDI2Q9BXS1 227 aa12.68□□□□□ -0.38
COMMD1-203ENST00000444166 BICC1Q9H694 974 aaKnown RBP12.68□□□□□ -0.38
COMMD1-203ENST00000444166 USP40Q9NVE5 1235 aa12.68□□□□□ -0.38
COMMD1-203ENST00000444166 MYH13Q9UKX3 1938 aa12.68□□□□□ -0.38
COMMD1-203ENST00000444166 PLXNB2O15031 1838 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 NCOR1O75376 2440 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 TRIM75PA6NK02 468 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 CTNND1O60716 968 aaKnown RBP12.67□□□□□ -0.38
COMMD1-203ENST00000444166 ENTPD3O75355 529 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
COMMD1-203ENST00000444166 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 RGS3P49796 1198 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
COMMD1-203ENST00000444166 TRIB2Q92519 343 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 PRDM6Q9NQX0 595 aa12.67□□□□□ -0.38
COMMD1-203ENST00000444166 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
COMMD1-203ENST00000444166 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
COMMD1-203ENST00000444166 GCLCP48506 637 aaPredicted RBP12.66□□□□□ -0.38
COMMD1-203ENST00000444166 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
COMMD1-203ENST00000444166 CCDC84Q86UT8 332 aaPredicted RBP12.66□□□□□ -0.38
COMMD1-203ENST00000444166 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
COMMD1-203ENST00000444166 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
COMMD1-203ENST00000444166 CDH23Q9H251 3354 aa12.65□□□□□ -0.38
COMMD1-203ENST00000444166 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.38
COMMD1-203ENST00000444166 LRRC26Q2I0M4 334 aa12.65□□□□□ -0.38
COMMD1-203ENST00000444166 PROCA1Q8NCQ7 364 aaPredicted RBP12.65□□□□□ -0.38
COMMD1-203ENST00000444166 KLHDC4Q8TBB5 520 aa12.65□□□□□ -0.38
COMMD1-203ENST00000444166 LRRFIP2Q9Y608 721 aaKnown RBP12.65□□□□□ -0.38
COMMD1-203ENST00000444166 GAKO14976 1311 aa12.64□□□□□ -0.39
COMMD1-203ENST00000444166 SALL1Q9NSC2 1324 aa12.64□□□□□ -0.39
COMMD1-203ENST00000444166 LDHBP07195 334 aaKnown RBP12.64□□□□□ -0.39
COMMD1-203ENST00000444166 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
COMMD1-203ENST00000444166 MDM2Q00987 491 aaPredicted RBP12.64□□□□□ -0.39
COMMD1-203ENST00000444166 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
COMMD1-203ENST00000444166 LPIN2Q92539 896 aa12.64□□□□□ -0.39
COMMD1-203ENST00000444166 DDX4Q9NQI0 724 aaKnown RBP12.64□□□□□ -0.39
COMMD1-203ENST00000444166 MORF4L1Q9UBU8 362 aa12.64□□□□□ -0.39
COMMD1-203ENST00000444166 MYH2Q9UKX2 1941 aa12.63□□□□□ -0.39
COMMD1-203ENST00000444166 ZBTB22O15209 634 aa12.63□□□□□ -0.39
COMMD1-203ENST00000444166 SLC5A1P13866 664 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms