RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 WWC3Q9ULE0 1092 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 ZDHHC9Q9Y397 364 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 SLC4A4Q9Y6R1 1079 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 MYH2Q9UKX2 1941 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 TAF1P21675 1872 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 DDX60LQ5H9U9 1706 aaKnown RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 PLIN4Q96Q06 1357 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 LTBP3Q9NS15 1303 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 CCDC69A6NI79 296 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 SH2B2O14492 632 aaPredicted RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 CTAGE5O15320 804 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 ZBTB43O43298 467 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 ENTPD3O75355 529 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 MBD4O95243 580 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 DEXIO95424 95 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 YEATS4O95619 227 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 BMP15O95972 392 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 APPP05067 770 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 MMP10P09238 476 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 U2AF2P26368 475 aaKnown RBP eCLIP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 KIF5BP33176 963 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 GYG1P46976 350 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 TRAPPC10P48553 1259 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 TDO2P48775 406 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 MRE11P49959 708 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 KIAA2012Q0VF49 1180 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 SCRN1Q12765 414 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 TRAF1Q13077 416 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 SEC23AQ15436 765 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 NTRK3Q16288 839 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 ZNF827Q17R98 1081 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 C12orf60Q5U649 245 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 MCTP2Q6DN12 878 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 APOA5Q6Q788 366 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 DPP8Q6V1X1 898 aaPredicted RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 BICDL1Q6ZP65 573 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 STOX1Q6ZVD7 989 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 C3orf67Q6ZVT6 689 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 TTC6Q86TZ1 520 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 AMIGO3Q86WK7 504 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 DZIP1Q86YF9 867 aaKnown RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 TRIM22Q8IYM9 498 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 JMYQ8N9B5 988 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 NSUN7Q8NE18 718 aaKnown RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 HELBQ8NG08 1087 aaPredicted RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 C7orf43Q8WVR3 580 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 BRF1Q92994 677 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 ZDHHC15Q96MV8 337 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 CCDC85AQ96PX6 553 aaPredicted RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 IDI2Q9BXS1 227 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 GLT8D2Q9H1C3 349 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 LY9Q9HBG7 655 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 LMBRD1Q9NUN5 540 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 POLR3EQ9NVU0 708 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 RAI14Q9P0K7 980 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 ZSWIM5Q9P217 1185 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 ABCF2Q9UG63 623 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 RCOR1Q9UKL0 485 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 NSFL1CQ9UNZ2 370 aaKnown RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 MTMR6Q9Y217 621 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 CD2APQ9Y5K6 639 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 SLC12A7Q9Y666 1083 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 MYH15Q9Y2K3 1946 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 CDK5RAP2Q96SN8 1893 aa3.3□□□□□ -1.88
LINC00393-201ENST00000443621 ZNF646O15015 1829 aaPredicted RBP3.3□□□□□ -1.88
LINC00393-201ENST00000443621 COL1A1P02452 1464 aaPredicted RBP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 ATRNL1Q5VV63 1379 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 BRCA1P38398 1863 aaKnown RBP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 NAV1Q8NEY1 1877 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 ECM29Q5VYK3 1845 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 FAM237AA0A1B0GTK4 181 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 A0A1W2PQ27 194 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 A0A1W2PQ64 194 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 A0A1W2PQD8 194 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 FSD2A1L4K1 749 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 USP17L3A6NCW0 530 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 USP17L4A6NCW7 530 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 FAM177BA6PVY3 158 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 H3BQV1 296 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 CPLX1O14810 134 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 IFIT3O14879 490 aaKnown RBP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 PRPF3O43395 683 aaKnown RBP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 PPP6R2O75170 966 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 UFL1O94874 794 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 FMNL1O95466 1100 aaPredicted RBP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 RPS12P25398 132 aaKnown RBP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 CALML3P27482 149 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 IARSP41252 1262 aaKnown RBP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 METAP2P50579 478 aaKnown RBP eCLIP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 ANTXR2P58335 489 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 GPSM2P81274 684 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 MAP3K10Q02779 954 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 GABPAQ06546 454 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 TROAPQ12815 778 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 WTAPQ15007 396 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 SAFBQ15424 915 aaKnown RBP eCLIP3.29□□□□□ -1.88
LINC00393-201ENST00000443621 UVSSAQ2YD98 709 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 HS1BP3Q53T59 392 aa3.29□□□□□ -1.88
LINC00393-201ENST00000443621 CCDC93Q567U6 631 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms