RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 PICALMQ13492 652 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 ZSCAN29Q8IWY8 852 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 TEX11Q8IYF3 940 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 EXOC6Q8TAG9 804 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 TEPSINQ96N21 525 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 PAG1Q9NWQ8 432 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 CSADQ9Y600 493 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 TTC41PQ6P2S7 1318 aa12.55□□□□□ -0.4
HLA-DQB1-206ENST00000443574 CA12O43570 354 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 CYP7A1P22680 504 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 NFIAQ12857 509 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 ZSCAN25Q6NSZ9 544 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 MOB2Q70IA6 237 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 CSRNP1Q96S65 589 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 HAUS7Q99871 368 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 ZNF341Q9BYN7 854 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 BOLA2Q9H3K6 86 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 ATRNL1Q5VV63 1379 aa12.54□□□□□ -0.4
HLA-DQB1-206ENST00000443574 AOC2O75106 756 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 WDHD1O75717 1129 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 ZBTB48P10074 688 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 LDLRAD1Q5T700 205 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 ZNF384Q8TF68 577 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 SLC10A4Q96EP9 437 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 SIPA1L1O43166 1804 aa12.53□□□□□ -0.4
HLA-DQB1-206ENST00000443574 FAM155AB1AL88 458 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 GLRX3O76003 335 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MX1P20591 662 aa12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 RHBDL3P58872 404 aa12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PPP4CP60510 307 aa12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ANKRD45Q5TZF3 282 aa12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 CDAN1Q8IWY9 1227 aa12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 OSBPL5Q9H0X9 879 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB1-206ENST00000443574 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PDE6AP16499 860 aa12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 USP5P45974 858 aa12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MIGA1Q8NAN2 632 aa12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 TRIM34Q9BYJ4 488 aa12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 DHX36Q9H2U1 1008 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 WBP1LQ9NX94 342 aa12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 FZD1Q9UP38 647 aa12.51□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PTPRFP10586 1907 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MAGEB6P1A0A0J9YX57 407 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MANSC4A6NHS7 340 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 HLA-DOAP06340 250 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 CTCFP49711 727 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 VGLL4Q14135 290 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ADGRA1Q86SQ6 560 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SMC5Q8IY18 1101 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 WNK4Q96J92 1243 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 DDX4Q9NQI0 724 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 FLT1P17948 1338 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ZNF532Q9HCE3 1301 aa12.5□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PHIPQ8WWQ0 1821 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ZFYP08048 801 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 INHBEP58166 350 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MIGA2Q7L4E1 593 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 CRACR2BQ8N4Y2 399 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 KBTBD3Q8NAB2 608 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 TGFBRAP1Q8WUH2 860 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 CLMNQ96JQ2 1002 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SAGE1Q9NXZ1 904 aa12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 HERC5Q9UII4 1024 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SPDYE5A6NIY4 337 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ADD2P35612 726 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 DYNLL1P63167 89 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 UBE3CQ15386 1083 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MAPKAPK5Q8IW41 473 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 AMOTL1Q8IY63 956 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 OPTNQ96CV9 577 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 EDC3Q96F86 508 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 LNPKQ9C0E8 428 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PICK1Q9NRD5 415 aa12.48□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PI4KBQ9UBF8 816 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms