RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 CPLX3Q8WVH0 158 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 HINFPQ9BQA5 517 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 USP44Q9H0E7 712 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 POLD4Q9HCU8 107 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 DLG5Q8TDM6 1919 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 A0A1W2PQ27 194 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 A0A1W2PQ64 194 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 A0A1W2PQD8 194 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 FLIIQ13045 1269 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 ILDR1Q86SU0 546 aaPredicted RBP11.14□□□□□ -0.63
ATL1-202ENST00000441560 CADPS2Q86UW7 1296 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 SAAL1Q96ER3 474 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 VCPKMTQ9H867 229 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 ABL1P00519 1130 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 RAB27AP51159 221 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 SF3B2Q13435 895 aaKnown RBP11.14□□□□□ -0.63
ATL1-202ENST00000441560 SLC5A9Q2M3M2 681 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 ARHGEF25Q86VW2 580 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 SELENOOQ9BVL4 669 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 PICK1Q9NRD5 415 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 CLIC4Q9Y696 253 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 ABCA9Q8IUA7 1624 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 ATXN2Q99700 1313 aaKnown RBP11.13□□□□□ -0.63
ATL1-202ENST00000441560 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 PTPDC1A2A3K4 754 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 A1BGP04217 495 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 USP14P54578 494 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 THEMIS2Q5TEJ8 643 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 ATL3Q6DD88 541 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 OLFM4Q6UX06 510 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 MICALCLQ6ZW33 695 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 PARP9Q8IXQ6 854 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 AFAP1Q8N556 730 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 CABP1Q9NZU7 370 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 BIN2Q9UBW5 565 aaPredicted RBP11.13□□□□□ -0.63
ATL1-202ENST00000441560 DNAJC5BQ9UF47 199 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 MYO6Q9UM54 1294 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 EFCAB6Q5THR3 1501 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 POLR3DP05423 398 aaPredicted RBP11.13□□□□□ -0.63
ATL1-202ENST00000441560 ATP1A2P50993 1020 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
ATL1-202ENST00000441560 CCDC114Q96M63 670 aa11.13□□□□□ -0.63
ATL1-202ENST00000441560 KIF1BO60333 1816 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 PFKFB1P16118 471 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 MCM3P25205 808 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 IFT88Q13099 833 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 PNOCQ13519 176 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 PDCD2Q16342 344 aaPredicted RBP11.12□□□□□ -0.63
ATL1-202ENST00000441560 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 SPATS2Q86XZ4 545 aaKnown RBP11.12□□□□□ -0.63
ATL1-202ENST00000441560 LINC00301Q8NCQ3 95 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 NSUN7Q8NE18 718 aaKnown RBP11.12□□□□□ -0.63
ATL1-202ENST00000441560 LMBR1Q8WVP7 490 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 SH3GL2Q99962 352 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 ALDH8A1Q9H2A2 487 aaPredicted RBP11.12□□□□□ -0.63
ATL1-202ENST00000441560 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 TET3O43151 1660 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
ATL1-202ENST00000441560 TLDC1Q6P9B6 456 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 CYB5D1Q6P9G0 228 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 FAM228AQ86W67 206 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 EVI5LQ96CN4 794 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 ATP6V0A4Q9HBG4 840 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 ECHDC1Q9NTX5 307 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 RTEL1Q9NZ71 1219 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 TSPYL4Q9UJ04 414 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 ABCC3O15438 1527 aa11.12□□□□□ -0.63
ATL1-202ENST00000441560 AKR1B15C9JRZ8 316 aaPredicted RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 SPTLC2O15270 562 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 USP4Q13107 963 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 RRS1Q15050 365 aaKnown RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 HSP90AB2PQ58FF8 381 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 ARMCX6Q7L4S7 300 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 ACRBPQ8NEB7 543 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 NEK1Q96PY6 1258 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 CHD2O14647 1828 aaKnown RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 MROH2AA6NES4 1674 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 MAP3K5Q99683 1374 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 NAA35Q5VZE5 725 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 CLASRPQ8N2M8 674 aaKnown RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 RSRC1Q96IZ7 334 aaKnown RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 SUDS3Q9H7L9 328 aaPredicted RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 NCOA5Q9HCD5 579 aaKnown RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 ZNF232Q9UNY5 417 aa11.11□□□□□ -0.63
ATL1-202ENST00000441560 NPHP4O75161 1426 aaPredicted RBP11.11□□□□□ -0.63
ATL1-202ENST00000441560 PPFIA2O75334 1257 aa11.1□□□□□ -0.63
ATL1-202ENST00000441560 CCDC181Q5TID7 509 aa11.1□□□□□ -0.63
ATL1-202ENST00000441560 OTUD7BQ6GQQ9 843 aa11.1□□□□□ -0.63
ATL1-202ENST00000441560 CAPZA3Q96KX2 299 aa11.1□□□□□ -0.63
ATL1-202ENST00000441560 C19orf44Q9H6X5 657 aa11.1□□□□□ -0.63
ATL1-202ENST00000441560 CHCHD3Q9NX63 227 aaKnown RBP11.1□□□□□ -0.63
ATL1-202ENST00000441560 TPX2Q9ULW0 747 aaKnown RBP11.1□□□□□ -0.63
ATL1-202ENST00000441560 CAMSAP1Q5T5Y3 1602 aa11.1□□□□□ -0.63
ATL1-202ENST00000441560 IFT172Q9UG01 1749 aa11.1□□□□□ -0.63
ATL1-202ENST00000441560 ENC1O14682 589 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms