RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 A0A1B0GUL7 405 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 FOXP2O15409 715 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 RRP9O43818 475 aaKnown RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 RPS6KA4O75676 772 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 UBA7P41226 1012 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 DLGAP5Q15398 846 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 APBB1IPQ7Z5R6 666 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 PUS3Q9BZE2 481 aaKnown RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 TRIM5Q9C035 493 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 DDX19AQ9NUU7 478 aaKnown RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 MCM9Q9NXL9 1143 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 KCNG1Q9UIX4 513 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 CDHR2Q9BYE9 1310 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 COL11A2P13942 1736 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 WTIPA6NIX2 430 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 TRAK2O60296 914 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 PRPF40AO75400 957 aaKnown RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 KIF4AO95239 1232 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 NAP1L1P55209 391 aaKnown RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 TFCP2Q12800 502 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 LRRC24Q50LG9 513 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 TNNI3KQ59H18 835 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 C2CD5Q86YS7 1000 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 CCDC83Q8IWF9 413 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 RRP36Q96EU6 259 aaKnown RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 BEGAINQ9BUH8 593 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 PRM3Q9NNZ6 103 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 DBNLQ9UJU6 430 aaKnown RBP5.22□□□□□ -1.57
SCN3A-204ENST00000440431 FPGT-TNNI3KV9GXZ4 949 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 CCDC171Q6TFL3 1326 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 KIAA1551Q9HCM1 1747 aa5.22□□□□□ -1.57
SCN3A-204ENST00000440431 NTSR2O95665 410 aa5.21□□□□□ -1.57
SCN3A-204ENST00000440431 CHMLP26374 656 aa5.21□□□□□ -1.57
SCN3A-204ENST00000440431 CTSWP56202 376 aa5.21□□□□□ -1.57
SCN3A-204ENST00000440431 PDE4CQ08493 712 aa5.21□□□□□ -1.57
SCN3A-204ENST00000440431 SUSD4Q5VX71 490 aa5.21□□□□□ -1.57
SCN3A-204ENST00000440431 TBC1D2Q9BYX2 928 aa5.21□□□□□ -1.57
SCN3A-204ENST00000440431 AS3MTQ9HBK9 375 aa5.21□□□□□ -1.57
SCN3A-204ENST00000440431 ANO10Q9NW15 660 aa5.21□□□□□ -1.57
SCN3A-204ENST00000440431 RBM8AQ9Y5S9 174 aaKnown RBP5.21□□□□□ -1.57
SCN3A-204ENST00000440431 HCLS1P14317 486 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-204ENST00000440431 GPR162Q16538 588 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 VPS36Q86VN1 386 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 ZNF397Q8NF99 534 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-204ENST00000440431 TTLL11Q8NHH1 800 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 ZNF594Q96JF6 807 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-204ENST00000440431 SCLT1Q96NL6 688 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 SLC5A4Q9NY91 659 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 RIPOR2Q9Y4F9 1068 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 CNTNAP4Q9C0A0 1308 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 CACNA1SQ13698 1873 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 KLF18A0A0U1RQI7 1052 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 PPIP5K2O43314 1243 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 CIAO1O76071 339 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 SERPINC1P01008 464 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 NCBP1Q09161 790 aaKnown RBP5.21□□□□□ -1.58
SCN3A-204ENST00000440431 DHX32Q7L7V1 743 aaKnown RBP5.21□□□□□ -1.58
SCN3A-204ENST00000440431 FAM114A1Q8IWE2 563 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 MAGEB6Q8N7X4 407 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 KBTBD3Q8NAB2 608 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 SMARCC2Q8TAQ2 1214 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 KCNB2Q92953 911 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 TEKT1Q969V4 418 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 UPF3BQ9BZI7 483 aaKnown RBP5.21□□□□□ -1.58
SCN3A-204ENST00000440431 RMND1Q9NWS8 449 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 PALD1Q9ULE6 856 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 RIMBP2O15034 1052 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 ATP5JP18859 108 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 TM4SF1P30408 202 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 PPP1R2P41236 205 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 MATR3P43243 847 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCN3A-204ENST00000440431 MAP3K11Q16584 847 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 RBM26Q5T8P6 1007 aaKnown RBP5.21□□□□□ -1.58
SCN3A-204ENST00000440431 RTKN2Q8IZC4 609 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 DDX11Q96FC9 970 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 TAF6LQ9Y6J9 622 aa5.21□□□□□ -1.58
SCN3A-204ENST00000440431 SPDYE3A6NKU9 549 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 COL1A1P02452 1464 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 XDHP47989 1333 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 FKBP15Q5T1M5 1219 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 ZFYVE27Q5T4F4 411 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 OTUD7BQ6GQQ9 843 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 ERCC4Q92889 916 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 XAGE2Q96GT9 111 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 ABCC12Q96J65 1359 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 MED23Q9ULK4 1368 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 F8W031 263 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 SLFNL1Q499Z3 407 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 PDILTQ8N807 584 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 KCNG4Q8TDN1 519 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 EDC3Q96F86 508 aaKnown RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC17Q96LX7 622 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 TANGO6Q9C0B7 1094 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 ARGLU1Q9NWB6 273 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 GJA3Q9Y6H8 435 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 PRC1O43663 620 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 SERPINB2P05120 415 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC172P0C7W6 258 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 NPR1P16066 1061 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms