RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 CXCL11O14625 94 aa16.65■□□□□ 0.26
FAM3A-213ENST00000440318 CDC42EP5Q6NZY7 148 aa16.65■□□□□ 0.26
FAM3A-213ENST00000440318 NECAB2Q7Z6G3 386 aa16.65■□□□□ 0.26
FAM3A-213ENST00000440318 PRRT2Q7Z6L0 340 aaPredicted RBP16.65■□□□□ 0.26
FAM3A-213ENST00000440318 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
FAM3A-213ENST00000440318 TAOK2Q9UL54 1235 aa16.65■□□□□ 0.26
FAM3A-213ENST00000440318 AK9Q5TCS8 1911 aa16.64■□□□□ 0.26
FAM3A-213ENST00000440318 SYN1P17600 705 aa16.64■□□□□ 0.25
FAM3A-213ENST00000440318 LRIT3Q3SXY7 679 aa16.64■□□□□ 0.25
FAM3A-213ENST00000440318 METTL24Q5JXM2 366 aa16.64■□□□□ 0.25
FAM3A-213ENST00000440318 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
FAM3A-213ENST00000440318 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.25
FAM3A-213ENST00000440318 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
FAM3A-213ENST00000440318 FAM198AQ9UFP1 575 aa16.64■□□□□ 0.25
FAM3A-213ENST00000440318 SUGT1Q9Y2Z0 365 aa16.64■□□□□ 0.25
FAM3A-213ENST00000440318 DAGLAQ9Y4D2 1042 aa16.64■□□□□ 0.25
FAM3A-213ENST00000440318 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.25
FAM3A-213ENST00000440318 PTPRFP10586 1907 aa16.63■□□□□ 0.25
FAM3A-213ENST00000440318 PHF20L1A8MW92 1017 aa16.63■□□□□ 0.25
FAM3A-213ENST00000440318 CT47B1P0C2W7 299 aaPredicted RBP16.63■□□□□ 0.25
FAM3A-213ENST00000440318 CAPN2P17655 700 aa16.63■□□□□ 0.25
FAM3A-213ENST00000440318 MAGEA10P43363 369 aaPredicted RBP16.63■□□□□ 0.25
FAM3A-213ENST00000440318 DIXDC1Q155Q3 683 aa16.63■□□□□ 0.25
FAM3A-213ENST00000440318 GADL1Q6ZQY3 521 aa16.63■□□□□ 0.25
FAM3A-213ENST00000440318 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
FAM3A-213ENST00000440318 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
FAM3A-213ENST00000440318 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
FAM3A-213ENST00000440318 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
FAM3A-213ENST00000440318 PDE8BO95263 885 aa16.62■□□□□ 0.25
FAM3A-213ENST00000440318 PTPRAP18433 802 aa16.62■□□□□ 0.25
FAM3A-213ENST00000440318 FASTKD5Q7L8L6 764 aaKnown RBP16.62■□□□□ 0.25
FAM3A-213ENST00000440318 SCYL3Q8IZE3 742 aa16.62■□□□□ 0.25
FAM3A-213ENST00000440318 TDHQ8IZJ6 230 aa16.62■□□□□ 0.25
FAM3A-213ENST00000440318 AFG3L2Q9Y4W6 797 aa16.62■□□□□ 0.25
FAM3A-213ENST00000440318 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
FAM3A-213ENST00000440318 ALDH1L1O75891 902 aa16.61■□□□□ 0.25
FAM3A-213ENST00000440318 NBPF7P0C2Y1 421 aaPredicted RBP16.61■□□□□ 0.25
FAM3A-213ENST00000440318 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
FAM3A-213ENST00000440318 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
FAM3A-213ENST00000440318 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
FAM3A-213ENST00000440318 ANKRD13CQ8N6S4 541 aa16.61■□□□□ 0.25
FAM3A-213ENST00000440318 KLHDC4Q8TBB5 520 aa16.61■□□□□ 0.25
FAM3A-213ENST00000440318 SMCR8Q8TEV9 937 aaPredicted RBP16.61■□□□□ 0.25
FAM3A-213ENST00000440318 SLC45A1Q9Y2W3 748 aa16.61■□□□□ 0.25
FAM3A-213ENST00000440318 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
FAM3A-213ENST00000440318 BCAR3O75815 825 aa16.6■□□□□ 0.25
FAM3A-213ENST00000440318 SLURP2P0DP57 97 aa16.6■□□□□ 0.25
FAM3A-213ENST00000440318 TRIM32Q13049 653 aa16.6■□□□□ 0.25
FAM3A-213ENST00000440318 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
FAM3A-213ENST00000440318 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.6■□□□□ 0.25
FAM3A-213ENST00000440318 ANKRD44Q8N8A2 993 aa16.6■□□□□ 0.25
FAM3A-213ENST00000440318 ANKLE1Q8NAG6 615 aa16.6■□□□□ 0.25
FAM3A-213ENST00000440318 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
FAM3A-213ENST00000440318 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.6■□□□□ 0.25
FAM3A-213ENST00000440318 MYH13Q9UKX3 1938 aa16.6■□□□□ 0.25
FAM3A-213ENST00000440318 VCANP13611 3396 aa16.6■□□□□ 0.25
FAM3A-213ENST00000440318 FGFR2P21802 821 aa16.59■□□□□ 0.25
FAM3A-213ENST00000440318 RABL6Q3YEC7 729 aaPredicted RBP16.59■□□□□ 0.25
FAM3A-213ENST00000440318 COA7Q96BR5 231 aa16.59■□□□□ 0.25
FAM3A-213ENST00000440318 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
FAM3A-213ENST00000440318 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
FAM3A-213ENST00000440318 PICK1Q9NRD5 415 aa16.59■□□□□ 0.25
FAM3A-213ENST00000440318 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
FAM3A-213ENST00000440318 KIF16BQ96L93 1317 aa16.59■□□□□ 0.25
FAM3A-213ENST00000440318 DOCK1Q14185 1865 aa16.59■□□□□ 0.25
FAM3A-213ENST00000440318 LAMA2P24043 3122 aaKnown RBP16.58■□□□□ 0.24
FAM3A-213ENST00000440318 EYSQ5T1H1 3165 aa16.58■□□□□ 0.24
FAM3A-213ENST00000440318 TRIM75PA6NK02 468 aa16.58■□□□□ 0.24
FAM3A-213ENST00000440318 PRDX5P30044 214 aa16.58■□□□□ 0.24
FAM3A-213ENST00000440318 PUM3Q15397 648 aaKnown RBP16.58■□□□□ 0.24
FAM3A-213ENST00000440318 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.24
FAM3A-213ENST00000440318 CCDC84Q86UT8 332 aaPredicted RBP16.58■□□□□ 0.24
FAM3A-213ENST00000440318 UBE2OQ9C0C9 1292 aaKnown RBP16.58■□□□□ 0.24
FAM3A-213ENST00000440318 C11orf49Q9H6J7 331 aa16.58■□□□□ 0.24
FAM3A-213ENST00000440318 UTYO14607 1347 aa16.57■□□□□ 0.24
FAM3A-213ENST00000440318 PFASO15067 1338 aa16.57■□□□□ 0.24
FAM3A-213ENST00000440318 HMGCRP04035 888 aa16.57■□□□□ 0.24
FAM3A-213ENST00000440318 TREML2Q5T2D2 321 aa16.57■□□□□ 0.24
FAM3A-213ENST00000440318 WDR66Q8TBY9 1149 aa16.57■□□□□ 0.24
FAM3A-213ENST00000440318 RCAN3Q9UKA8 241 aa16.57■□□□□ 0.24
FAM3A-213ENST00000440318 AGTPBP1Q9UPW5 1226 aa16.57■□□□□ 0.24
FAM3A-213ENST00000440318 RFX7Q2KHR2 1363 aa16.56■□□□□ 0.24
FAM3A-213ENST00000440318 IFIT1P09914 478 aaKnown RBP16.56■□□□□ 0.24
FAM3A-213ENST00000440318 RGS3P49796 1198 aa16.56■□□□□ 0.24
FAM3A-213ENST00000440318 FAM110CQ1W6H9 321 aa16.56■□□□□ 0.24
FAM3A-213ENST00000440318 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
FAM3A-213ENST00000440318 GUCD1Q96NT3 240 aa16.56■□□□□ 0.24
FAM3A-213ENST00000440318 RPTORQ8N122 1335 aa16.55■□□□□ 0.24
FAM3A-213ENST00000440318 PLXNB2O15031 1838 aa16.55■□□□□ 0.24
FAM3A-213ENST00000440318 HMX1Q9NP08 348 aaPredicted RBP16.55■□□□□ 0.24
FAM3A-213ENST00000440318 GJD2Q9UKL4 321 aa16.55■□□□□ 0.24
FAM3A-213ENST00000440318 OGDHLQ9ULD0 1010 aa16.55■□□□□ 0.24
FAM3A-213ENST00000440318 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
FAM3A-213ENST00000440318 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
FAM3A-213ENST00000440318 MAP3K10Q02779 954 aa16.54■□□□□ 0.24
FAM3A-213ENST00000440318 TRIB2Q92519 343 aa16.54■□□□□ 0.24
FAM3A-213ENST00000440318 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
FAM3A-213ENST00000440318 LRRFIP2Q9Y608 721 aaKnown RBP16.54■□□□□ 0.24
FAM3A-213ENST00000440318 LOC285556D6RIA3 1793 aa16.54■□□□□ 0.24
FAM3A-213ENST00000440318 PTPRCP08575 1304 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms