RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 NOL9Q5SY16 702 aaKnown RBP23.06■■□□□ 1.28
CCDC78-204ENST00000439619 PI16Q6UXB8 463 aa23.06■■□□□ 1.28
CCDC78-204ENST00000439619 TBC1D9Q6ZT07 1266 aa23.06■■□□□ 1.28
CCDC78-204ENST00000439619 ERC1Q8IUD2 1116 aa23.06■■□□□ 1.28
CCDC78-204ENST00000439619 ZFPM1Q8IX07 1006 aa23.06■■□□□ 1.28
CCDC78-204ENST00000439619 FAM43AQ8N2R8 423 aa23.06■■□□□ 1.28
CCDC78-204ENST00000439619 NSUN4Q96CB9 384 aaKnown RBP23.06■■□□□ 1.28
CCDC78-204ENST00000439619 CHMP4BQ9H444 224 aaKnown RBP23.06■■□□□ 1.28
CCDC78-204ENST00000439619 EFCC1Q9HA90 598 aa23.06■■□□□ 1.28
CCDC78-204ENST00000439619 NPM3O75607 178 aaKnown RBP23.05■■□□□ 1.28
CCDC78-204ENST00000439619 BAG3O95817 575 aa23.05■■□□□ 1.28
CCDC78-204ENST00000439619 HSP90AB4PQ58FF6 505 aa23.05■■□□□ 1.28
CCDC78-204ENST00000439619 OTOP1Q7RTM1 612 aa23.05■■□□□ 1.28
CCDC78-204ENST00000439619 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.05■■□□□ 1.28
CCDC78-204ENST00000439619 CD99L2Q8TCZ2 262 aa23.05■■□□□ 1.28
CCDC78-204ENST00000439619 PANK1Q8TE04 598 aa23.05■■□□□ 1.28
CCDC78-204ENST00000439619 DBNDD2Q9BQY9 259 aa23.05■■□□□ 1.28
CCDC78-204ENST00000439619 LAMB1P07942 1786 aa23.04■■□□□ 1.28
CCDC78-204ENST00000439619 KIF22Q14807 665 aa23.04■■□□□ 1.28
CCDC78-204ENST00000439619 CEP85Q6P2H3 762 aa23.04■■□□□ 1.28
CCDC78-204ENST00000439619 ZNF512BQ96KM6 892 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-204ENST00000439619 BTBD19C9JJ37 291 aa23.03■■□□□ 1.28
CCDC78-204ENST00000439619 PLCG2P16885 1265 aa23.03■■□□□ 1.28
CCDC78-204ENST00000439619 NAA16Q6N069 864 aaPredicted RBP23.03■■□□□ 1.28
CCDC78-204ENST00000439619 SCYL3Q8IZE3 742 aa23.03■■□□□ 1.28
CCDC78-204ENST00000439619 SNRKQ9NRH2 765 aa23.03■■□□□ 1.28
CCDC78-204ENST00000439619 RFX7Q2KHR2 1363 aa23.02■■□□□ 1.28
CCDC78-204ENST00000439619 TLR2O60603 784 aa23.02■■□□□ 1.28
CCDC78-204ENST00000439619 ANKRD23Q86SG2 305 aa23.02■■□□□ 1.28
CCDC78-204ENST00000439619 DDX19BQ9UMR2 479 aa23.02■■□□□ 1.28
CCDC78-204ENST00000439619 KCNH4Q9UQ05 1017 aa23.02■■□□□ 1.28
CCDC78-204ENST00000439619 CXCL11O14625 94 aa23.01■■□□□ 1.27
CCDC78-204ENST00000439619 CTNND1O60716 968 aaKnown RBP23.01■■□□□ 1.27
CCDC78-204ENST00000439619 RHBDL3P58872 404 aa23.01■■□□□ 1.27
CCDC78-204ENST00000439619 TEX11Q8IYF3 940 aa23.01■■□□□ 1.27
CCDC78-204ENST00000439619 DDX4Q9NQI0 724 aaKnown RBP23.01■■□□□ 1.27
CCDC78-204ENST00000439619 PTPN22Q9Y2R2 807 aa23.01■■□□□ 1.27
CCDC78-204ENST00000439619 DDTLA6NHG4 134 aaPredicted RBP23■■□□□ 1.27
CCDC78-204ENST00000439619 HMMRO75330 724 aa23■■□□□ 1.27
CCDC78-204ENST00000439619 MAP3K10Q02779 954 aa23■■□□□ 1.27
CCDC78-204ENST00000439619 SH3BP5LQ7L8J4 393 aa23■■□□□ 1.27
CCDC78-204ENST00000439619 ZHX2Q9Y6X8 837 aa23■■□□□ 1.27
CCDC78-204ENST00000439619 PHF20L1A8MW92 1017 aa22.99■■□□□ 1.27
CCDC78-204ENST00000439619 PDHXO00330 501 aa22.99■■□□□ 1.27
CCDC78-204ENST00000439619 TBC1D12O60347 775 aa22.99■■□□□ 1.27
CCDC78-204ENST00000439619 FASTKD5Q7L8L6 764 aaKnown RBP22.99■■□□□ 1.27
CCDC78-204ENST00000439619 RPAP2Q8IXW5 612 aaPredicted RBP22.99■■□□□ 1.27
CCDC78-204ENST00000439619 ZNF384Q8TF68 577 aa22.99■■□□□ 1.27
CCDC78-204ENST00000439619 CCDC8Q9H0W5 538 aaPredicted RBP22.99■■□□□ 1.27
CCDC78-204ENST00000439619 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.99■■□□□ 1.27
CCDC78-204ENST00000439619 DBNLQ9UJU6 430 aaKnown RBP22.99■■□□□ 1.27
CCDC78-204ENST00000439619 RCAN3Q9UKA8 241 aa22.99■■□□□ 1.27
CCDC78-204ENST00000439619 ATRNL1Q5VV63 1379 aa22.99■■□□□ 1.27
CCDC78-204ENST00000439619 MYH2Q9UKX2 1941 aa22.98■■□□□ 1.27
CCDC78-204ENST00000439619 OSBPL5Q9H0X9 879 aaPredicted RBP22.98■■□□□ 1.27
CCDC78-204ENST00000439619 EXOC6BQ9Y2D4 811 aa22.98■■□□□ 1.27
CCDC78-204ENST00000439619 GNRH1P01148 92 aa22.97■■□□□ 1.27
CCDC78-204ENST00000439619 CYP2E1P05181 493 aaPredicted RBP22.97■■□□□ 1.27
CCDC78-204ENST00000439619 PTPRAP18433 802 aa22.97■■□□□ 1.27
CCDC78-204ENST00000439619 AACSQ86V21 672 aa22.97■■□□□ 1.27
CCDC78-204ENST00000439619 CERS3Q8IU89 383 aa22.97■■□□□ 1.27
CCDC78-204ENST00000439619 EAF2Q96CJ1 260 aaPredicted RBP22.97■■□□□ 1.27
CCDC78-204ENST00000439619 PARK7Q99497 189 aaKnown RBP22.97■■□□□ 1.27
CCDC78-204ENST00000439619 DHX36Q9H2U1 1008 aaKnown RBP22.97■■□□□ 1.27
CCDC78-204ENST00000439619 AATFQ9NY61 560 aaKnown RBP eCLIP22.97■■□□□ 1.27
CCDC78-204ENST00000439619 ZAP70P43403 619 aa22.96■■□□□ 1.27
CCDC78-204ENST00000439619 NBPF11Q86T75 865 aa22.96■■□□□ 1.27
CCDC78-204ENST00000439619 COL2A1P02458 1487 aaPredicted RBP22.96■■□□□ 1.27
CCDC78-204ENST00000439619 PPP4CP60510 307 aa22.95■■□□□ 1.26
CCDC78-204ENST00000439619 LACTBP83111 547 aaPredicted RBP22.95■■□□□ 1.26
CCDC78-204ENST00000439619 TMED8Q6PL24 325 aaPredicted RBP22.95■■□□□ 1.26
CCDC78-204ENST00000439619 SH3RF3Q8TEJ3 882 aaPredicted RBP22.95■■□□□ 1.26
CCDC78-204ENST00000439619 TRIM34Q9BYJ4 488 aa22.95■■□□□ 1.26
CCDC78-204ENST00000439619 TLR7Q9NYK1 1049 aaKnown RBP22.95■■□□□ 1.26
CCDC78-204ENST00000439619 PI4KBQ9UBF8 816 aa22.95■■□□□ 1.26
CCDC78-204ENST00000439619 HERC5Q9UII4 1024 aaKnown RBP22.95■■□□□ 1.26
CCDC78-204ENST00000439619 COG6Q9Y2V7 657 aa22.95■■□□□ 1.26
CCDC78-204ENST00000439619 AK9Q5TCS8 1911 aa22.94■■□□□ 1.26
CCDC78-204ENST00000439619 IDH1O75874 414 aaKnown RBP22.94■■□□□ 1.26
CCDC78-204ENST00000439619 CLASRPQ8N2M8 674 aaKnown RBP22.94■■□□□ 1.26
CCDC78-204ENST00000439619 KIF1BPQ96EK5 621 aa22.94■■□□□ 1.26
CCDC78-204ENST00000439619 TBC1D2Q9BYX2 928 aa22.94■■□□□ 1.26
CCDC78-204ENST00000439619 AFG3L2Q9Y4W6 797 aa22.94■■□□□ 1.26
CCDC78-204ENST00000439619 A0A0G2JLL6 359 aaPredicted RBP22.93■■□□□ 1.26
CCDC78-204ENST00000439619 PRMT2P55345 433 aa22.93■■□□□ 1.26
CCDC78-204ENST00000439619 MAP3K12Q12852 859 aa22.93■■□□□ 1.26
CCDC78-204ENST00000439619 C17orf99Q6UX52 265 aa22.93■■□□□ 1.26
CCDC78-204ENST00000439619 GADL1Q6ZQY3 521 aa22.93■■□□□ 1.26
CCDC78-204ENST00000439619 PRRT2Q7Z6L0 340 aaPredicted RBP22.93■■□□□ 1.26
CCDC78-204ENST00000439619 RHPN1Q8TCX5 695 aa22.93■■□□□ 1.26
CCDC78-204ENST00000439619 DOCK2Q92608 1830 aa22.92■■□□□ 1.26
CCDC78-204ENST00000439619 CYP7A1P22680 504 aa22.92■■□□□ 1.26
CCDC78-204ENST00000439619 HOXD10P28358 340 aa22.92■■□□□ 1.26
CCDC78-204ENST00000439619 SLC9C1Q4G0N8 1177 aa22.92■■□□□ 1.26
CCDC78-204ENST00000439619 CRACR2BQ8N4Y2 399 aaPredicted RBP22.92■■□□□ 1.26
CCDC78-204ENST00000439619 TGFBRAP1Q8WUH2 860 aa22.92■■□□□ 1.26
CCDC78-204ENST00000439619 PIH1D3Q9NQM4 214 aaKnown RBP22.92■■□□□ 1.26
CCDC78-204ENST00000439619 ZBTB40Q9NUA8 1239 aa22.92■■□□□ 1.26
CCDC78-204ENST00000439619 CPA4Q9UI42 421 aa22.92■■□□□ 1.26
CCDC78-204ENST00000439619 TRIM75PA6NK02 468 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms