RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 TAF1CQ15572 869 aaPredicted RBP24.98■■□□□ 1.59
NCKIPSD-206ENST00000439518 DBNDD2Q9BQY9 259 aa24.98■■□□□ 1.59
NCKIPSD-206ENST00000439518 ZCCHC17Q9NP64 241 aaKnown RBP24.98■■□□□ 1.59
NCKIPSD-206ENST00000439518 PHF20L1A8MW92 1017 aa24.97■■□□□ 1.59
NCKIPSD-206ENST00000439518 LDHCP07864 332 aa24.97■■□□□ 1.59
NCKIPSD-206ENST00000439518 GSTO1P78417 241 aa24.97■■□□□ 1.59
NCKIPSD-206ENST00000439518 CEP85Q6P2H3 762 aa24.97■■□□□ 1.59
NCKIPSD-206ENST00000439518 CD99L2Q8TCZ2 262 aa24.97■■□□□ 1.59
NCKIPSD-206ENST00000439518 ZFYVE28Q9HCC9 887 aa24.97■■□□□ 1.59
NCKIPSD-206ENST00000439518 TRIM17Q9Y577 477 aa24.97■■□□□ 1.59
NCKIPSD-206ENST00000439518 HTTP42858 3142 aa24.97■■□□□ 1.59
NCKIPSD-206ENST00000439518 DDTLA6NHG4 134 aaPredicted RBP24.96■■□□□ 1.59
NCKIPSD-206ENST00000439518 BTBD19C9JJ37 291 aa24.96■■□□□ 1.59
NCKIPSD-206ENST00000439518 NPM3O75607 178 aaKnown RBP24.96■■□□□ 1.59
NCKIPSD-206ENST00000439518 ZNF512BQ96KM6 892 aaPredicted RBP24.96■■□□□ 1.59
NCKIPSD-206ENST00000439518 RAI14Q9P0K7 980 aa24.96■■□□□ 1.59
NCKIPSD-206ENST00000439518 KCNH4Q9UQ05 1017 aa24.96■■□□□ 1.59
NCKIPSD-206ENST00000439518 MAP4K4O95819 1239 aaPredicted RBP24.95■■□□□ 1.58
NCKIPSD-206ENST00000439518 CAP1Q01518 475 aa24.95■■□□□ 1.58
NCKIPSD-206ENST00000439518 CCDC158Q5M9N0 1113 aa24.95■■□□□ 1.58
NCKIPSD-206ENST00000439518 TTC39AQ5SRH9 613 aa24.95■■□□□ 1.58
NCKIPSD-206ENST00000439518 ZSCAN29Q8IWY8 852 aaPredicted RBP24.95■■□□□ 1.58
NCKIPSD-206ENST00000439518 SNRKQ9NRH2 765 aa24.95■■□□□ 1.58
NCKIPSD-206ENST00000439518 PICALMQ13492 652 aa24.94■■□□□ 1.58
NCKIPSD-206ENST00000439518 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.94■■□□□ 1.58
NCKIPSD-206ENST00000439518 LRP2BPQ9P2M1 347 aa24.94■■□□□ 1.58
NCKIPSD-206ENST00000439518 DBNLQ9UJU6 430 aaKnown RBP24.94■■□□□ 1.58
NCKIPSD-206ENST00000439518 DOCK2Q92608 1830 aa24.93■■□□□ 1.58
NCKIPSD-206ENST00000439518 MS4A1P11836 297 aa24.93■■□□□ 1.58
NCKIPSD-206ENST00000439518 EFCC1Q9HA90 598 aa24.93■■□□□ 1.58
NCKIPSD-206ENST00000439518 TNRC18O15417 2968 aaPredicted RBP24.92■■□□□ 1.58
NCKIPSD-206ENST00000439518 TLR2O60603 784 aa24.92■■□□□ 1.58
NCKIPSD-206ENST00000439518 CYP2E1P05181 493 aaPredicted RBP24.92■■□□□ 1.58
NCKIPSD-206ENST00000439518 MOGSQ13724 837 aa24.92■■□□□ 1.58
NCKIPSD-206ENST00000439518 EAF2Q96CJ1 260 aaPredicted RBP24.92■■□□□ 1.58
NCKIPSD-206ENST00000439518 SLURP2P0DP57 97 aa24.91■■□□□ 1.58
NCKIPSD-206ENST00000439518 ANKRD23Q86SG2 305 aa24.91■■□□□ 1.58
NCKIPSD-206ENST00000439518 SCYL3Q8IZE3 742 aa24.91■■□□□ 1.58
NCKIPSD-206ENST00000439518 TLR7Q9NYK1 1049 aaKnown RBP24.91■■□□□ 1.58
NCKIPSD-206ENST00000439518 PTPN22Q9Y2R2 807 aa24.91■■□□□ 1.58
NCKIPSD-206ENST00000439518 CXCL11O14625 94 aa24.9■■□□□ 1.58
NCKIPSD-206ENST00000439518 CCDC8Q9H0W5 538 aaPredicted RBP24.9■■□□□ 1.58
NCKIPSD-206ENST00000439518 COL2A1P02458 1487 aaPredicted RBP24.89■■□□□ 1.58
NCKIPSD-206ENST00000439518 TBC1D12O60347 775 aa24.89■■□□□ 1.58
NCKIPSD-206ENST00000439518 CTNND1O60716 968 aaKnown RBP24.89■■□□□ 1.58
NCKIPSD-206ENST00000439518 PTPRAP18433 802 aa24.89■■□□□ 1.58
NCKIPSD-206ENST00000439518 NAA16Q6N069 864 aaPredicted RBP24.89■■□□□ 1.58
NCKIPSD-206ENST00000439518 EXOC6BQ9Y2D4 811 aa24.89■■□□□ 1.58
NCKIPSD-206ENST00000439518 IGSF3O75054 1194 aa24.88■■□□□ 1.57
NCKIPSD-206ENST00000439518 ZAP70P43403 619 aa24.88■■□□□ 1.57
NCKIPSD-206ENST00000439518 ERC1Q8IUD2 1116 aa24.88■■□□□ 1.57
NCKIPSD-206ENST00000439518 OSBPL5Q9H0X9 879 aaPredicted RBP24.88■■□□□ 1.57
NCKIPSD-206ENST00000439518 PICK1Q9NRD5 415 aa24.88■■□□□ 1.57
NCKIPSD-206ENST00000439518 ZHX2Q9Y6X8 837 aa24.88■■□□□ 1.57
NCKIPSD-206ENST00000439518 PDHXO00330 501 aa24.87■■□□□ 1.57
NCKIPSD-206ENST00000439518 PPP4CP60510 307 aa24.87■■□□□ 1.57
NCKIPSD-206ENST00000439518 TEX11Q8IYF3 940 aa24.87■■□□□ 1.57
NCKIPSD-206ENST00000439518 SH3RF3Q8TEJ3 882 aaPredicted RBP24.87■■□□□ 1.57
NCKIPSD-206ENST00000439518 PIH1D3Q9NQM4 214 aaKnown RBP24.87■■□□□ 1.57
NCKIPSD-206ENST00000439518 RCAN3Q9UKA8 241 aa24.87■■□□□ 1.57
NCKIPSD-206ENST00000439518 PDE4DIPQ5VU43 2346 aa24.86■■□□□ 1.57
NCKIPSD-206ENST00000439518 ARHGEF6Q15052 776 aa24.86■■□□□ 1.57
NCKIPSD-206ENST00000439518 C17orf99Q6UX52 265 aa24.86■■□□□ 1.57
NCKIPSD-206ENST00000439518 ADGRA1Q86SQ6 560 aa24.86■■□□□ 1.57
NCKIPSD-206ENST00000439518 ZBTB40Q9NUA8 1239 aa24.86■■□□□ 1.57
NCKIPSD-206ENST00000439518 AFG3L2Q9Y4W6 797 aa24.86■■□□□ 1.57
NCKIPSD-206ENST00000439518 ADGRA2Q96PE1 1338 aa24.86■■□□□ 1.57
NCKIPSD-206ENST00000439518 MAST2Q6P0Q8 1798 aa24.85■■□□□ 1.57
NCKIPSD-206ENST00000439518 BAG3O95817 575 aa24.85■■□□□ 1.57
NCKIPSD-206ENST00000439518 LACTBP83111 547 aaPredicted RBP24.85■■□□□ 1.57
NCKIPSD-206ENST00000439518 GPAT2Q6NUI2 795 aa24.85■■□□□ 1.57
NCKIPSD-206ENST00000439518 NOL10Q9BSC4 688 aaKnown RBP24.85■■□□□ 1.57
NCKIPSD-206ENST00000439518 DDX19BQ9UMR2 479 aa24.85■■□□□ 1.57
NCKIPSD-206ENST00000439518 COG6Q9Y2V7 657 aa24.85■■□□□ 1.57
NCKIPSD-206ENST00000439518 A0A0G2JLL6 359 aaPredicted RBP24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 PLCG2P16885 1265 aa24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 HSP90AB4PQ58FF6 505 aa24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 PRRT2Q7Z6L0 340 aaPredicted RBP24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 SIRT2Q8IXJ6 389 aa24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 RPAP2Q8IXW5 612 aaPredicted RBP24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 ARMC5Q96C12 935 aa24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 AATFQ9NY61 560 aaKnown RBP eCLIP24.84■■□□□ 1.57
NCKIPSD-206ENST00000439518 FAM196BA6NMK8 535 aa24.83■■□□□ 1.57
NCKIPSD-206ENST00000439518 AACSQ86V21 672 aa24.83■■□□□ 1.57
NCKIPSD-206ENST00000439518 ARHGAP39Q9C0H5 1083 aa24.83■■□□□ 1.57
NCKIPSD-206ENST00000439518 DOCK1Q14185 1865 aa24.82■■□□□ 1.56
NCKIPSD-206ENST00000439518 FASTKD5Q7L8L6 764 aaKnown RBP24.82■■□□□ 1.56
NCKIPSD-206ENST00000439518 RHPN1Q8TCX5 695 aa24.82■■□□□ 1.56
NCKIPSD-206ENST00000439518 CPA4Q9UI42 421 aa24.82■■□□□ 1.56
NCKIPSD-206ENST00000439518 MYO5AQ9Y4I1 1855 aaKnown RBP24.82■■□□□ 1.56
NCKIPSD-206ENST00000439518 CENPFP49454 3210 aa24.81■■□□□ 1.56
NCKIPSD-206ENST00000439518 KIF22Q14807 665 aa24.81■■□□□ 1.56
NCKIPSD-206ENST00000439518 DHX36Q9H2U1 1008 aaKnown RBP24.81■■□□□ 1.56
NCKIPSD-206ENST00000439518 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.81■■□□□ 1.56
NCKIPSD-206ENST00000439518 PHIPQ8WWQ0 1821 aa24.8■■□□□ 1.56
NCKIPSD-206ENST00000439518 CCDC84Q86UT8 332 aaPredicted RBP24.8■■□□□ 1.56
NCKIPSD-206ENST00000439518 TGFBRAP1Q8WUH2 860 aa24.8■■□□□ 1.56
NCKIPSD-206ENST00000439518 PARK7Q99497 189 aaKnown RBP24.8■■□□□ 1.56
NCKIPSD-206ENST00000439518 IL1RAPL2Q9NP60 686 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms