RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 POLD1P28340 1107 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 CCDC122Q5T0U0 273 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 INTS8Q75QN2 995 aaKnown RBP16.85■□□□□ 0.29
TSC2-206ENST00000439117 USP21Q9UK80 565 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 ELP1O95163 1332 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 ACTN2P35609 894 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 TIMM10P62072 90 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 IL17REQ8NFR9 667 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 STMN2Q93045 179 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 VCXQ9H320 206 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 ATP2A1O14983 1001 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 PRC1O43663 620 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
TSC2-206ENST00000439117 GOLGA5Q8TBA6 731 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 TLDC2A0PJX2 215 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 PHKG2P15735 406 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 GCKRQ14397 625 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 STXBP4Q6ZWJ1 553 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 CLSTN2Q9H4D0 955 aa16.85■□□□□ 0.29
TSC2-206ENST00000439117 GOLGA6BA6NDN3 693 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 MARCKSP29966 332 aaPredicted RBP16.84■□□□□ 0.29
TSC2-206ENST00000439117 PICALMQ13492 652 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 MIGA1Q8NAN2 632 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 ROBO2Q9HCK4 1378 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 SPATS2Q86XZ4 545 aaKnown RBP16.84■□□□□ 0.29
TSC2-206ENST00000439117 SREK1Q8WXA9 508 aaKnown RBP16.84■□□□□ 0.29
TSC2-206ENST00000439117 CBX8Q9HC52 389 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 LDHBP07195 334 aaKnown RBP16.84■□□□□ 0.29
TSC2-206ENST00000439117 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 RUFY4Q6ZNE9 571 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 RBM17Q96I25 401 aaKnown RBP16.84■□□□□ 0.29
TSC2-206ENST00000439117 FERP16591 822 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 CREB3L3Q68CJ9 461 aa16.84■□□□□ 0.29
TSC2-206ENST00000439117 TRIM14Q14142 442 aa16.83■□□□□ 0.29
TSC2-206ENST00000439117 TNNI3KQ59H18 835 aa16.83■□□□□ 0.29
TSC2-206ENST00000439117 FPGT-TNNI3KV9GXZ4 949 aa16.83■□□□□ 0.29
TSC2-206ENST00000439117 NOL3O60936 208 aaKnown RBP16.83■□□□□ 0.28
TSC2-206ENST00000439117 GBP1P32455 592 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 CROCCP2Q86T23 111 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 MCM9Q9NXL9 1143 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 CCDC110Q8TBZ0 833 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 STAT6P42226 847 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 TRAF1Q13077 416 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 SUCLG2Q96I99 432 aa16.83■□□□□ 0.28
TSC2-206ENST00000439117 PUM3Q15397 648 aaKnown RBP16.82■□□□□ 0.28
TSC2-206ENST00000439117 TBC1D5Q92609 795 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
TSC2-206ENST00000439117 VIMP08670 466 aaKnown RBP16.82■□□□□ 0.28
TSC2-206ENST00000439117 SH3BGRP55822 239 aaPredicted RBP16.82■□□□□ 0.28
TSC2-206ENST00000439117 UBXN1Q04323 297 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 CCDC38Q502W7 563 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 TSC1Q92574 1164 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 MMRN2Q9H8L6 949 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 ATP5DP30049 168 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 GCKP35557 465 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 AP1ARQ63HQ0 302 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 LRRC45Q96CN5 670 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 DBNDD2Q9BQY9 259 aa16.82■□□□□ 0.28
TSC2-206ENST00000439117 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 NKIRAS1Q9NYS0 192 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 KRT13P13646 458 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 LRCH2Q5VUJ6 765 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 PPP4R3AQ6IN85 833 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 C8orf74Q6P047 294 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 JDP2Q8WYK2 163 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.81■□□□□ 0.286e-6■■□□□ 12.1
TSC2-206ENST00000439117 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 TMEM63CQ9P1W3 806 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 SERPINA10Q9UK55 444 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 ATP7BP35670 1465 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 BICDL2A1A5D9 508 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.28
TSC2-206ENST00000439117 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 HELLSQ9NRZ9 838 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 HPDP32754 393 aaPredicted RBP16.81■□□□□ 0.28
TSC2-206ENST00000439117 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
TSC2-206ENST00000439117 CCDC26Q8TAB7 109 aa16.81■□□□□ 0.28
TSC2-206ENST00000439117 ZNF526Q8TF50 670 aaPredicted RBP16.81■□□□□ 0.28
TSC2-206ENST00000439117 ARHGEF25Q86VW2 580 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 KIAA1524Q8TCG1 905 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 TRIM75PA6NK02 468 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 CEP85LQ5SZL2 805 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 DHX32Q7L7V1 743 aaKnown RBP16.8■□□□□ 0.28
TSC2-206ENST00000439117 IFT20Q8IY31 132 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 FANCCQ00597 558 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 RPGRIP1Q96KN7 1286 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 TSNARE1Q96NA8 513 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 ATP8B1O43520 1251 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 CALM1P0DP23 149 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 CALM2P0DP24 149 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 CALM3P0DP25 149 aa16.8■□□□□ 0.28
TSC2-206ENST00000439117 UBLCP1Q8WVY7 318 aaPredicted RBP16.8■□□□□ 0.28
TSC2-206ENST00000439117 ZNF594Q96JF6 807 aaPredicted RBP16.8■□□□□ 0.28
TSC2-206ENST00000439117 EFCC1Q9HA90 598 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms