RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 USP17L21D6R901 530 aa17.59■□□□□ 0.41
LINC00163-202ENST00000439088 BAG3O95817 575 aa17.59■□□□□ 0.41
LINC00163-202ENST00000439088 FDPSP14324 419 aaKnown RBP17.59■□□□□ 0.41
LINC00163-202ENST00000439088 SBK1Q52WX2 424 aa17.59■□□□□ 0.41
LINC00163-202ENST00000439088 ESR2Q92731 530 aa17.59■□□□□ 0.41
LINC00163-202ENST00000439088 COA1Q9GZY4 146 aa17.59■□□□□ 0.41
LINC00163-202ENST00000439088 FAM205AQ6ZU69 1335 aa17.58■□□□□ 0.4
LINC00163-202ENST00000439088 CPLX1O14810 134 aa17.58■□□□□ 0.4
LINC00163-202ENST00000439088 GRIK5Q16478 980 aa17.58■□□□□ 0.4
LINC00163-202ENST00000439088 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.4
LINC00163-202ENST00000439088 NFXL1Q6ZNB6 911 aa17.58■□□□□ 0.4
LINC00163-202ENST00000439088 SENP2Q9HC62 589 aa17.58■□□□□ 0.4
LINC00163-202ENST00000439088 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.4
LINC00163-202ENST00000439088 ERICH2A1L162 156 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 GOLGA6L3A6NEY3 463 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 H0YIN7 160 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 ZBTB43O43298 467 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.4
LINC00163-202ENST00000439088 STYK1Q6J9G0 422 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 C2CD5Q86YS7 1000 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 CERS3Q8IU89 383 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.4
LINC00163-202ENST00000439088 ZC3H12CQ9C0D7 883 aaKnown RBP17.57■□□□□ 0.4
LINC00163-202ENST00000439088 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
LINC00163-202ENST00000439088 SLC12A7Q9Y666 1083 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 GADD45BO75293 160 aaPredicted RBP17.57■□□□□ 0.4
LINC00163-202ENST00000439088 KRT85P78386 507 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 RESTQ13127 1097 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 L1TD1Q5T7N2 865 aaKnown RBP17.57■□□□□ 0.4
LINC00163-202ENST00000439088 DPP8Q6V1X1 898 aaPredicted RBP17.57■□□□□ 0.4
LINC00163-202ENST00000439088 STK11IPQ8N1F8 1099 aa17.57■□□□□ 0.4
LINC00163-202ENST00000439088 NOL10Q9BSC4 688 aaKnown RBP17.57■□□□□ 0.4
LINC00163-202ENST00000439088 CYP2D7A0A087X1C5 515 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 CDKL5O76039 1030 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
LINC00163-202ENST00000439088 WTAPQ15007 396 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 SYNE3Q6ZMZ3 975 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 RAB11FIP4Q86YS3 637 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 COL11A2P13942 1736 aaPredicted RBP17.56■□□□□ 0.4
LINC00163-202ENST00000439088 QSER1Q2KHR3 1735 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 BAZ2AQ9UIF9 1905 aaKnown RBP17.56■□□□□ 0.4
LINC00163-202ENST00000439088 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 RIMBP2O15034 1052 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 FIBPO43427 364 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
LINC00163-202ENST00000439088 UBE2HP62256 183 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 DIXDC1Q155Q3 683 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 MFSD14BQ5SR56 506 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 CPLX2Q6PUV4 134 aaKnown RBP17.56■□□□□ 0.4
LINC00163-202ENST00000439088 SLF2Q8IX21 1173 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 FAM163AQ96GL9 167 aaPredicted RBP17.56■□□□□ 0.4
LINC00163-202ENST00000439088 UBAC1Q9BSL1 405 aa17.56■□□□□ 0.4
LINC00163-202ENST00000439088 ORC3Q9UBD5 711 aaPredicted RBP17.56■□□□□ 0.4
LINC00163-202ENST00000439088 MKRN1Q9UHC7 482 aaKnown RBP17.56■□□□□ 0.4
LINC00163-202ENST00000439088 SMIM22K7EJ46 135 aa17.55■□□□□ 0.4
LINC00163-202ENST00000439088 ADD1P35611 737 aaKnown RBP17.55■□□□□ 0.4
LINC00163-202ENST00000439088 BAG6P46379 1132 aa17.55■□□□□ 0.4
LINC00163-202ENST00000439088 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
LINC00163-202ENST00000439088 GPR75-ASB3A0A0A6YYF3 556 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 ORC4O43929 436 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 RCAN1P53805 252 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 OLFM4Q6UX06 510 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 SH3RF3Q8TEJ3 882 aaPredicted RBP17.54■□□□□ 0.4
LINC00163-202ENST00000439088 RTFDC1Q9BY42 306 aaPredicted RBP17.54■□□□□ 0.4
LINC00163-202ENST00000439088 SCAND2PQ9GZW5 306 aaPredicted RBP17.54■□□□□ 0.4
LINC00163-202ENST00000439088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC00163-202ENST00000439088 NID2Q14112 1375 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 GOLGA8AA7E2F4 631 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 USP5P45974 858 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 ZNF445P59923 1031 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 ZSCAN23Q3MJ62 389 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 MICU3Q86XE3 530 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 EYA3Q99504 573 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 FAM217BQ9NTX9 383 aaPredicted RBP17.54■□□□□ 0.4
LINC00163-202ENST00000439088 MCM9Q9NXL9 1143 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 SUGT1Q9Y2Z0 365 aa17.54■□□□□ 0.4
LINC00163-202ENST00000439088 PPFIA3O75145 1194 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 CDC27P30260 824 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 GTF2IP78347 998 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 SEC23AQ15436 765 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 TMEM63CQ9P1W3 806 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 ELP1O95163 1332 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
LINC00163-202ENST00000439088 RXRAP19793 462 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 NT5C2P49902 561 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 PDE4BQ07343 736 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 NTRK3Q16288 839 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 C12orf60Q5U649 245 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 SYAP1Q96A49 352 aaPredicted RBP17.53■□□□□ 0.4
LINC00163-202ENST00000439088 C8orf76Q96K31 380 aa17.53■□□□□ 0.4
LINC00163-202ENST00000439088 ZSCAN10Q96SZ4 725 aaPredicted RBP17.53■□□□□ 0.4
LINC00163-202ENST00000439088 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
LINC00163-202ENST00000439088 MYH2Q9UKX2 1941 aa17.52■□□□□ 0.4
LINC00163-202ENST00000439088 PLCG2P16885 1265 aa17.52■□□□□ 0.4
LINC00163-202ENST00000439088 IQCA1Q86XH1 822 aa17.52■□□□□ 0.4
LINC00163-202ENST00000439088 FBXO18Q8NFZ0 1043 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms