RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 CNTNAP1P78357 1384 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 F8W031 263 aaPredicted RBP14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 VIL1P09327 827 aaKnown RBP14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 AK2P54819 239 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 ANKRD1Q15327 319 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 SBK1Q52WX2 424 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 NCOA7Q8NI08 942 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 SH3RF3Q8TEJ3 882 aaPredicted RBP14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 JDP2Q8WYK2 163 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 TEKT1Q969V4 418 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 NBPF3Q9H094 633 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 DCP1AQ9NPI6 582 aaPredicted RBP14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 FER1L6Q2WGJ9 1857 aa14.65□□□□□ -0.06
HLA-DOB-206ENST00000438763 USP5P45974 858 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 CRKP46108 304 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 RHBDL3P58872 404 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 EXOSC10Q01780 885 aaKnown RBP14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 PPARAQ07869 468 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 TRDNQ13061 729 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 RSBN1LQ6PCB5 846 aaPredicted RBP14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 KIAA0825Q8IV33 1275 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 LIMCH1Q9UPQ0 1083 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 SCN9AQ15858 1988 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 MYH2Q9UKX2 1941 aa14.64□□□□□ -0.07
HLA-DOB-206ENST00000438763 MINDY4BA8MYZ0 360 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 USP17L12C9JPN9 530 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 USP17L21D6R901 530 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 VEGFBP49765 207 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 SCNN1DP51172 638 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 COL9A3Q14050 684 aaPredicted RBP14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 AKNAD1Q5T1N1 836 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 CTR9Q6PD62 1173 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 TBC1D10CQ8IV04 446 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 TEX11Q8IYF3 940 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 STAG1Q8WVM7 1258 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 TMX3Q96JJ7 454 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 ZSCAN31Q96LW9 406 aaPredicted RBP14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 ZDHHC15Q96MV8 337 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 RNF41Q9H4P4 317 aaPredicted RBP14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 CNNM2Q9H8M5 875 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 ARPP21Q9UBL0 812 aaPredicted RBP14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 SERPINA10Q9UK55 444 aa14.63□□□□□ -0.07
HLA-DOB-206ENST00000438763 COL4A5P29400 1685 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 WDR19Q8NEZ3 1342 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 PSMD14O00487 310 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 RAD17O75943 681 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 PCP11498 1178 aaKnown RBP14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 MCM5P33992 734 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 MLLT1Q03111 559 aaPredicted RBP14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 CTDSPL2Q05D32 466 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 CXCL9Q07325 125 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 MFSD6Q6ZSS7 791 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 MB21D2Q8IYB1 491 aaPredicted RBP14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 FBXL16Q8N461 479 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 TGFBRAP1Q8WUH2 860 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 GMLQ99445 158 aa14.62□□□□□ -0.07
HLA-DOB-206ENST00000438763 ZNF646O15015 1829 aaPredicted RBP14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 CUL4AQ13619 759 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 TNIP1Q15025 636 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 CIAPIN1Q6FI81 312 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 APOBEC3HQ6NTF7 200 aaKnown RBP14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 Q6ZUG5 572 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 AGBL3Q8NEM8 1001 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 AGXT2Q9BYV1 514 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 KRT23Q9C075 422 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 USP40Q9NVE5 1235 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 MCM9Q9NXL9 1143 aa14.61□□□□□ -0.07
HLA-DOB-206ENST00000438763 CCDC85CA6NKD9 419 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 HSP90AA1P07900 732 aaKnown RBP14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 SLC3A2P08195 630 aaKnown RBP14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 FGRP09769 529 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 MMP14P50281 582 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 TOB2Q14106 344 aaPredicted RBP14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 C12orf60Q5U649 245 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 AMOTL1Q8IY63 956 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 TCEANC2Q96MN5 208 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 SH2B1Q9NRF2 756 aaPredicted RBP14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 WBP1LQ9NX94 342 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 HDAC9Q9UKV0 1011 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 PSME4Q14997 1843 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 LAMA4Q16363 1823 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 PRC1O43663 620 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 USP17L8P0C7I0 530 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 HSPA8P11142 646 aaKnown RBP14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 NT5C2P49902 561 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 DPY19L2Q6NUT2 758 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 CDC42EP5Q6NZY7 148 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 NOL8Q76FK4 1167 aaKnown RBP14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 MAPKAPK5Q8IW41 473 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 SPRYD3Q8NCJ5 442 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 INTS4Q96HW7 963 aaKnown RBP14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 TACC3Q9Y6A5 838 aa14.6□□□□□ -0.07
HLA-DOB-206ENST00000438763 NEDD4P46934 1319 aa14.59□□□□□ -0.07
HLA-DOB-206ENST00000438763 CYP2D7A0A087X1C5 515 aa14.59□□□□□ -0.07
HLA-DOB-206ENST00000438763 B4E1Z4 1266 aa14.59□□□□□ -0.07
HLA-DOB-206ENST00000438763 FZD9O00144 591 aa14.59□□□□□ -0.07
HLA-DOB-206ENST00000438763 WDHD1O75717 1129 aaPredicted RBP14.59□□□□□ -0.07
HLA-DOB-206ENST00000438763 RBM5P52756 815 aaKnown RBP eCLIP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms