RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TCP10L2B9ZVM9 353 aa9.7□□□□□ -0.86
VPS50-204ENST00000438395 MAP3K7O43318 606 aa9.7□□□□□ -0.86
VPS50-204ENST00000438395 PUM3Q15397 648 aaKnown RBP9.7□□□□□ -0.86
VPS50-204ENST00000438395 ERO1AQ96HE7 468 aa9.7□□□□□ -0.86
VPS50-204ENST00000438395 CFHR5Q9BXR6 569 aa9.7□□□□□ -0.86
VPS50-204ENST00000438395 TDRD3Q9H7E2 651 aaKnown RBP9.7□□□□□ -0.86
VPS50-204ENST00000438395 HDAC5Q9UQL6 1122 aa9.7□□□□□ -0.86
VPS50-204ENST00000438395 UTYO14607 1347 aa9.7□□□□□ -0.86
VPS50-204ENST00000438395 SSC5DA1L4H1 1573 aa9.7□□□□□ -0.86
VPS50-204ENST00000438395 PDE8BO95263 885 aa9.69□□□□□ -0.86
VPS50-204ENST00000438395 UBTFL1P0CB47 393 aaPredicted RBP9.69□□□□□ -0.86
VPS50-204ENST00000438395 SLC5A1P13866 664 aa9.69□□□□□ -0.86
VPS50-204ENST00000438395 ARHGEF6Q15052 776 aa9.69□□□□□ -0.86
VPS50-204ENST00000438395 RABL6Q3YEC7 729 aaPredicted RBP9.69□□□□□ -0.86
VPS50-204ENST00000438395 SSH1Q8WYL5 1049 aa9.69□□□□□ -0.86
VPS50-204ENST00000438395 OPTNQ96CV9 577 aa9.69□□□□□ -0.86
VPS50-204ENST00000438395 ELP3Q9H9T3 547 aa9.69□□□□□ -0.86
VPS50-204ENST00000438395 RIPOR2Q9Y4F9 1068 aa9.69□□□□□ -0.86
VPS50-204ENST00000438395 TRIM17Q9Y577 477 aa9.69□□□□□ -0.86
VPS50-204ENST00000438395 ZNF521Q96K83 1311 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 GOLGA8CPA6NN73 597 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 IGF2BP3O00425 579 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPS50-204ENST00000438395 GTF2A2P52657 109 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 HDLBPQ00341 1268 aaKnown RBP9.68□□□□□ -0.86
VPS50-204ENST00000438395 LRRC24Q50LG9 513 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 DCAF15Q66K64 600 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 FBXO33Q7Z6M2 555 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 ANKRD44Q8N8A2 993 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 KAZALD1Q96I82 304 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 TMEM39BQ9GZU3 492 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 GNL3LQ9NVN8 582 aaKnown RBP9.68□□□□□ -0.86
VPS50-204ENST00000438395 KIAA1468Q9P260 1216 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 SUGT1Q9Y2Z0 365 aa9.68□□□□□ -0.86
VPS50-204ENST00000438395 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
VPS50-204ENST00000438395 AOX1Q06278 1338 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 KIF16BQ96L93 1317 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 CCL15-CCL14A0A0B4J2E2 113 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 EYA2O00167 538 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 USP2O75604 605 aaPredicted RBP9.67□□□□□ -0.86
VPS50-204ENST00000438395 BCAMP50895 628 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 CRHR2Q13324 411 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 TAF1CQ15572 869 aaPredicted RBP9.67□□□□□ -0.86
VPS50-204ENST00000438395 CCL15Q16663 113 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 KLHDC4Q8TBB5 520 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 WDR66Q8TBY9 1149 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 LPIN2Q92539 896 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 WNT2BQ93097 391 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 NBPF3Q9H094 633 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 SEPT9Q9UHD8 586 aaPredicted RBP9.67□□□□□ -0.86
VPS50-204ENST00000438395 RABGEF1Q9UJ41 708 aa9.67□□□□□ -0.86
VPS50-204ENST00000438395 ZNF646O15015 1829 aaPredicted RBP9.67□□□□□ -0.86
VPS50-204ENST00000438395 CACNB3P54284 484 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 SP3Q02447 781 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 VGLL4Q14135 290 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 ATP2B3Q16720 1220 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
VPS50-204ENST00000438395 INTS3Q68E01 1043 aaKnown RBP9.66□□□□□ -0.86
VPS50-204ENST00000438395 THSD4Q6ZMP0 1018 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 OTOP1Q7RTM1 612 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 ZDHHC15Q96MV8 337 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 WRNIP1Q96S55 665 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 API5Q9BZZ5 524 aaKnown RBP9.66□□□□□ -0.86
VPS50-204ENST00000438395 USP44Q9H0E7 712 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 SIL1Q9H173 461 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 R3HDMLQ9H3Y0 253 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 EFCC1Q9HA90 598 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 ZFYVE28Q9HCC9 887 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 CEP126Q9P2H0 1117 aa9.66□□□□□ -0.86
VPS50-204ENST00000438395 CT47B1P0C2W7 299 aaPredicted RBP9.65□□□□□ -0.86
VPS50-204ENST00000438395 CETPP11597 493 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 GJA5P36382 358 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 SLFN5Q08AF3 891 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 SNAPC2Q13487 334 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 KIF22Q14807 665 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 FKBP1CQ5VVH2 108 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 FAM83AQ86UY5 434 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 VGLL2Q8N8G2 317 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 CD99L2Q8TCZ2 262 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 CDHR5Q9HBB8 845 aa9.65□□□□□ -0.86
VPS50-204ENST00000438395 A0A1B0GUL6 1792 aa9.65□□□□□ -0.87
VPS50-204ENST00000438395 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
VPS50-204ENST00000438395 LDHBP07195 334 aaKnown RBP9.64□□□□□ -0.87
VPS50-204ENST00000438395 HHIPL2Q6UWX4 724 aa9.64□□□□□ -0.87
VPS50-204ENST00000438395 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.64□□□□□ -0.87
VPS50-204ENST00000438395 ERO1BQ86YB8 467 aa9.64□□□□□ -0.87
VPS50-204ENST00000438395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS50-204ENST00000438395 BRI3BPQ8WY22 251 aa9.64□□□□□ -0.87
VPS50-204ENST00000438395 TEPSINQ96N21 525 aa9.64□□□□□ -0.87
VPS50-204ENST00000438395 MRIQ9BWK5 157 aa9.64□□□□□ -0.87
VPS50-204ENST00000438395 ZNF341Q9BYN7 854 aa9.64□□□□□ -0.87
VPS50-204ENST00000438395 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
VPS50-204ENST00000438395 RPAP1Q9BWH6 1393 aaPredicted RBP9.63□□□□□ -0.87
VPS50-204ENST00000438395 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
VPS50-204ENST00000438395 TRIM6-TRIM34B2RNG4 842 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 SEMA3EO15041 775 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 CIAO1O76071 339 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 FGFR2P21802 821 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 OSBPP22059 807 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms