RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 GREM2Q9H772 168 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 KRT19P08727 400 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 CDAN1Q8IWY9 1227 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 NECAB1Q8N987 351 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 OTUD5Q96G74 571 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 MAP3K1Q13233 1512 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 GSTTP1A0A1W2PQM5 241 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 TRPC3Q13507 836 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 SESTD1Q86VW0 696 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 CPLX3Q8WVH0 158 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 ARHGEF1Q92888 912 aaKnown RBP13.76□□□□□ -0.21
UBE3B-203ENST00000434735 ZNF532Q9HCE3 1301 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 MLH3Q9UHC1 1453 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 ARHGEF35A5YM69 484 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 USP19O94966 1318 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 FRMPD2Q68DX3 1309 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-203ENST00000434735 FSIP1Q8NA03 581 aa13.76□□□□□ -0.21
UBE3B-203ENST00000434735 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 MAPKBP1O60336 1514 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 SEPT14Q6ZU15 432 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 MTERF4Q7Z6M4 381 aaKnown RBP13.75□□□□□ -0.21
UBE3B-203ENST00000434735 TBC1D5Q92609 795 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 HOXB7P09629 217 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 GJB2P29033 226 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 HUNKP57058 714 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 RBM28Q9NW13 759 aaKnown RBP13.75□□□□□ -0.21
UBE3B-203ENST00000434735 KDM5CP41229 1560 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 GPAA1O43292 621 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 IFRD2Q12894 506 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-203ENST00000434735 VAMP4O75379 141 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 CCT6AP40227 531 aaKnown RBP13.75□□□□□ -0.21
UBE3B-203ENST00000434735 ARHGAP45Q92619 1136 aa13.75□□□□□ -0.21
UBE3B-203ENST00000434735 WRNIP1Q96S55 665 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 PYM1Q9BRP8 204 aaKnown RBP13.74□□□□□ -0.21
UBE3B-203ENST00000434735 MARCKSP29966 332 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-203ENST00000434735 NUP88Q99567 741 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-203ENST00000434735 KCNH4Q9UQ05 1017 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBE3B-203ENST00000434735 CCDC171Q6TFL3 1326 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 SMIM5Q71RC9 77 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 FILIP1Q7Z7B0 1213 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 NAP1L4Q99733 375 aaKnown RBP13.74□□□□□ -0.21
UBE3B-203ENST00000434735 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 USP17L12C9JPN9 530 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 USP17L21D6R901 530 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 CELF2O95319 508 aaKnown RBP13.74□□□□□ -0.21
UBE3B-203ENST00000434735 FAM193AP78312 1265 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 PRPF4BQ13523 1007 aaKnown RBP13.74□□□□□ -0.21
UBE3B-203ENST00000434735 GRAPQ13588 217 aa13.74□□□□□ -0.21
UBE3B-203ENST00000434735 GRAPLQ8TC17 118 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-203ENST00000434735 PCCAP05165 728 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-203ENST00000434735 TAF3Q5VWG9 929 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 TTC30AQ86WT1 665 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 SPAG5Q96R06 1193 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 MYL3P08590 195 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 PDE1AP54750 535 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 DPF3Q92784 378 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 BABAM1Q9NWV8 329 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 ECE2O60344 883 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 ADCY7P51828 1080 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 TAF1CQ15572 869 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-203ENST00000434735 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
UBE3B-203ENST00000434735 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.21
UBE3B-203ENST00000434735 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 RRAGBQ5VZM2 374 aa13.73□□□□□ -0.21
UBE3B-203ENST00000434735 TMCO5BA8MYB1 307 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 CCNT1O60563 726 aaKnown RBP13.72□□□□□ -0.21
UBE3B-203ENST00000434735 ANKRD44Q8N8A2 993 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 TNPO2O14787 897 aaKnown RBP13.72□□□□□ -0.21
UBE3B-203ENST00000434735 TMOD1P28289 359 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 ECE1P42892 770 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 RPS6KC1Q96S38 1066 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 ZHX2Q9Y6X8 837 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 UBXN2AP68543 259 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 TTC22Q5TAA0 569 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 CCDC125Q86Z20 511 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 FAM114A1Q8IWE2 563 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-203ENST00000434735 POLIQ9UNA4 740 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
UBE3B-203ENST00000434735 BMP15O95972 392 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 ALS2CR12Q96Q35 445 aa13.72□□□□□ -0.21
UBE3B-203ENST00000434735 CACNB3P54284 484 aa13.71□□□□□ -0.21
UBE3B-203ENST00000434735 SDR42E1Q8WUS8 393 aa13.71□□□□□ -0.21
UBE3B-203ENST00000434735 DYDC1Q8WWB3 177 aa13.71□□□□□ -0.21
UBE3B-203ENST00000434735 APPBP2Q92624 585 aa13.71□□□□□ -0.21
UBE3B-203ENST00000434735 SSFA2P28290 1259 aa13.71□□□□□ -0.21
UBE3B-203ENST00000434735 DTHD1Q6ZMT9 781 aa13.71□□□□□ -0.21
UBE3B-203ENST00000434735 MCF2L2Q86YR7 1114 aa13.71□□□□□ -0.21
UBE3B-203ENST00000434735 MSANTD4Q8NCY6 345 aa13.71□□□□□ -0.21
UBE3B-203ENST00000434735 ARPP21Q9UBL0 812 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-203ENST00000434735 ADD3Q9UEY8 706 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms