RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 PANK2Q9BZ23 570 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 CNTNAP3Q9BZ76 1288 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 PRDM11Q9NQV5 511 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 PDRG1Q9NUG6 133 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 CWC25Q9NXE8 425 aaPredicted RBP8.85□□□□□ -0.99
COL17A1-204ENST00000433822 PPP1R1BQ9UD71 204 aaPredicted RBP8.85□□□□□ -0.99
COL17A1-204ENST00000433822 SMC3Q9UQE7 1217 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 CICQ96RK0 1608 aaPredicted RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 A0A087WZG4 1122 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 TTLL8A6PVC2 850 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 SLC27A2O14975 620 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 ZNF609O15014 1411 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 STX6O43752 255 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 MYL6BP14649 208 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 CASTP20810 708 aaKnown RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 IL15P40933 162 aaPredicted RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 UBE2HP62256 183 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 FOXO4P98177 505 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 KRT76Q01546 638 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 NMIQ13287 307 aaPredicted RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 UVSSAQ2YD98 709 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 LRRFIP1Q32MZ4 808 aaKnown RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 EPHA10Q5JZY3 1008 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 VASH1Q7L8A9 365 aaPredicted RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 SH3RF1Q7Z6J0 888 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 FBXL16Q8N461 479 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 RGS22Q8NE09 1264 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 TRIM44Q96DX7 344 aaPredicted RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 JAKMIP1Q96N16 626 aaKnown RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 FSD1Q9BTV5 496 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 ISCA1Q9BUE6 129 aa8.84□□□□□ -0.99
COL17A1-204ENST00000433822 DBNLQ9UJU6 430 aaKnown RBP8.84□□□□□ -0.99
COL17A1-204ENST00000433822 COL14A1Q05707 1796 aaKnown RBP8.84□□□□□ -1
COL17A1-204ENST00000433822 ELP1O95163 1332 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 TOGARAM1Q9Y4F4 1720 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 ESPNB1AK53 854 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 TAF5LO75529 589 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 F13A1P00488 732 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 SYT1P21579 422 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 RPS6KB1P23443 525 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 MCM5P33992 734 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 CHRNA2Q15822 529 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 NBPF14Q5TI25 921 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 NBPF10Q6P3W6 841 aaKnown RBP8.83□□□□□ -1
COL17A1-204ENST00000433822 BLOC1S2Q6QNY1 142 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 UBE3BQ7Z3V4 1068 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 TRMT44Q8IYL2 757 aaKnown RBP8.83□□□□□ -1
COL17A1-204ENST00000433822 CCDC116Q8IYX3 515 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 NBPF15Q8N660 670 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 KBTBD3Q8NAB2 608 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 CABLES1Q8TDN4 633 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 DSCC1Q9BVC3 393 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 HELLSQ9NRZ9 838 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 TMEM63CQ9P1W3 806 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 TCHHQ07283 1943 aa8.83□□□□□ -1
COL17A1-204ENST00000433822 CDHR2Q9BYE9 1310 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 ANKRD36CQ5JPF3 1778 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 A0A0D9SFI3 127 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 TRIM37O94972 964 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 MAP4K4O95819 1239 aaPredicted RBP8.82□□□□□ -1
COL17A1-204ENST00000433822 PTSQ03393 145 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 MCMDC2Q4G0Z9 681 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 PRPF40BQ6NWY9 871 aaKnown RBP8.82□□□□□ -1
COL17A1-204ENST00000433822 TOM1L2Q6ZVM7 507 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 NANOS1Q8WY41 292 aaKnown RBP8.82□□□□□ -1
COL17A1-204ENST00000433822 TSC1Q92574 1164 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 FAM227BQ96M60 508 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 LLPHQ9BRT6 129 aaKnown RBP8.82□□□□□ -1
COL17A1-204ENST00000433822 AGXT2Q9BYV1 514 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 CCDC8Q9H0W5 538 aaPredicted RBP8.82□□□□□ -1
COL17A1-204ENST00000433822 BOLA2Q9H3K6 86 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 SPON1Q9HCB6 807 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 TLR7Q9NYK1 1049 aaKnown RBP8.82□□□□□ -1
COL17A1-204ENST00000433822 WNK3Q9BYP7 1800 aa8.82□□□□□ -1
COL17A1-204ENST00000433822 EYA2O00167 538 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 KCNQ2O43526 872 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 PCCAP05165 728 aaPredicted RBP8.81□□□□□ -1
COL17A1-204ENST00000433822 ZFYP08048 801 aaPredicted RBP8.81□□□□□ -1
COL17A1-204ENST00000433822 KCNJ4P48050 445 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 TFCP2Q12800 502 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 TCIRG1Q13488 830 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 ADCK5Q3MIX3 580 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 HSP90AB3PQ58FF7 597 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 CCDC183Q5T5S1 534 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 ATG9AQ7Z3C6 839 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 PARP9Q8IXQ6 854 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 ZNF512BQ96KM6 892 aaPredicted RBP8.81□□□□□ -1
COL17A1-204ENST00000433822 COL25A1Q9BXS0 654 aaPredicted RBP8.81□□□□□ -1
COL17A1-204ENST00000433822 PDGFDQ9GZP0 370 aaPredicted RBP8.81□□□□□ -1
COL17A1-204ENST00000433822 RRAGDQ9NQL2 400 aaPredicted RBP8.81□□□□□ -1
COL17A1-204ENST00000433822 MTMR6Q9Y217 621 aa8.81□□□□□ -1
COL17A1-204ENST00000433822 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.81□□□□□ -1
COL17A1-204ENST00000433822 ITGB4P16144 1822 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 GJB2P29033 226 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 TERF1P54274 439 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 ME3Q16798 604 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 ZMYM1Q5SVZ6 1142 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms