RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 DISC1Q9NRI5 854 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 METTL5Q9NRN9 209 aaKnown RBP5.86□□□□□ -1.47
LINC01239-201ENST00000433645 FAM105AQ9NUU6 356 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 SNCAIPQ9Y6H5 919 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 FANCGO15287 622 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 ITGB7P26010 798 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 ERMP1Q7Z2K6 904 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 RELL1Q8IUW5 271 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 TRIM42Q8IWZ5 723 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 PHC3Q8NDX5 983 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 FBLIM1Q8WUP2 373 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 MIR1-1HGQ9H1L0 117 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 SEMA6CQ9H3T2 930 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 PIDD1Q9HB75 910 aa5.85□□□□□ -1.47
LINC01239-201ENST00000433645 HMX2A2RU54 273 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 RXRBP28702 533 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 LMNB2Q03252 620 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 SEZ6L2Q6UXD5 910 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 CYFIP1Q7L576 1253 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 HDXQ7Z353 690 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 KCT2Q8NC54 265 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 GIMAP7Q8NHV1 300 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 TMEM74Q96NL1 305 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 KCNQ5Q9NR82 932 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 PRKAG2Q9UGJ0 569 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 PCOLCE2Q9UKZ9 415 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 PCDHA4Q9UN74 947 aa5.84□□□□□ -1.47
LINC01239-201ENST00000433645 TFE3P19532 575 aaPredicted RBP5.83□□□□□ -1.48
LINC01239-201ENST00000433645 NFKBIBQ15653 356 aa5.83□□□□□ -1.48
LINC01239-201ENST00000433645 TSNAXIP1Q2TAA8 658 aa5.83□□□□□ -1.48
LINC01239-201ENST00000433645 LDLRAD1Q5T700 205 aa5.83□□□□□ -1.48
LINC01239-201ENST00000433645 MPRIPQ6WCQ1 1025 aa5.83□□□□□ -1.48
LINC01239-201ENST00000433645 HS2ST1Q7LGA3 356 aa5.83□□□□□ -1.48
LINC01239-201ENST00000433645 SMYD4Q8IYR2 804 aaPredicted RBP5.83□□□□□ -1.48
LINC01239-201ENST00000433645 RHOVQ96L33 236 aa5.83□□□□□ -1.48
LINC01239-201ENST00000433645 RNF112Q9ULX5 631 aa5.83□□□□□ -1.48
LINC01239-201ENST00000433645 ROBO2Q9HCK4 1378 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 NFICP08651 508 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 CYP27A1Q02318 531 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 RPL6Q02878 288 aaKnown RBP5.82□□□□□ -1.48
LINC01239-201ENST00000433645 CAMK2GQ13555 558 aaPredicted RBP5.82□□□□□ -1.48
LINC01239-201ENST00000433645 TTLL4Q14679 1199 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 ZBTB37Q5TC79 503 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 ZAR1Q86SH2 424 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 TMEM87AQ8NBN3 555 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 ELMO3Q96BJ8 720 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 METTL22Q9BUU2 404 aaPredicted RBP5.82□□□□□ -1.48
LINC01239-201ENST00000433645 BACH2Q9BYV9 841 aa5.82□□□□□ -1.48
LINC01239-201ENST00000433645 GFRA2O00451 464 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 NEFMP07197 916 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 RAB6AP20340 208 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 NTF4P34130 210 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 CAP2P40123 477 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 PTPN11Q06124 597 aaPredicted RBP5.81□□□□□ -1.48
LINC01239-201ENST00000433645 MAP3K11Q16584 847 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 LRFN4Q6PJG9 635 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 ZDHHC13Q8IUH4 622 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 GATAD2BQ8WXI9 593 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 GATA6Q92908 595 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 C1GALT1Q9NS00 363 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 PCDHB5Q9Y5E4 795 aa5.81□□□□□ -1.48
LINC01239-201ENST00000433645 FAM221AA4D161 298 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 SCAMP3O14828 347 aaKnown RBP5.8□□□□□ -1.48
LINC01239-201ENST00000433645 CILPO75339 1184 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 GBP2P32456 591 aaPredicted RBP5.8□□□□□ -1.48
LINC01239-201ENST00000433645 ZNF76P36508 570 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 INPP5AQ14642 412 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 INTS5Q6P9B9 1019 aaKnown RBP5.8□□□□□ -1.48
LINC01239-201ENST00000433645 ZNF507Q8TCN5 953 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 ISL2Q96A47 359 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 PLPPR2Q96GM1 343 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 WNT10AQ9GZT5 417 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 GGT7Q9UJ14 662 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 TLR6Q9Y2C9 796 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 DAGLAQ9Y4D2 1042 aa5.8□□□□□ -1.48
LINC01239-201ENST00000433645 DCDC2CA8MYV0 355 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 RECKO95980 971 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 PF4P02776 101 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 FANCCQ00597 558 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 SEPT6Q14141 434 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 PPM1JQ5JR12 505 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 WIPI1Q5MNZ9 446 aaPredicted RBP5.79□□□□□ -1.48
LINC01239-201ENST00000433645 OGFOD3Q6PK18 319 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 C12orf40Q86WS4 652 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 SHKBP1Q8TBC3 707 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 MRRFQ96E11 262 aaKnown RBP5.79□□□□□ -1.48
LINC01239-201ENST00000433645 TBC1D32Q96NH3 1257 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 PSMG3-AS1Q96PY0 264 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 LRRC3Q9BY71 257 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 ATG3Q9NT62 314 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 KBTBD4Q9NVX7 518 aa5.79□□□□□ -1.48
LINC01239-201ENST00000433645 PRR36Q9H6K5 1346 aa5.78□□□□□ -1.48
LINC01239-201ENST00000433645 PRR19A6NJB7 356 aa5.78□□□□□ -1.48
LINC01239-201ENST00000433645 GREM1O60565 184 aa5.78□□□□□ -1.48
LINC01239-201ENST00000433645 RNGTTO60942 597 aaKnown RBP5.78□□□□□ -1.48
LINC01239-201ENST00000433645 F13BP05160 661 aa5.78□□□□□ -1.48
LINC01239-201ENST00000433645 HCLS1P14317 486 aaPredicted RBP5.78□□□□□ -1.48
LINC01239-201ENST00000433645 GARTP22102 1010 aa5.78□□□□□ -1.48
LINC01239-201ENST00000433645 GRIK1P39086 918 aa5.78□□□□□ -1.48
LINC01239-201ENST00000433645 PDE4BQ07343 736 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms