RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 USP17L1Q7RTZ2 530 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 TMEM87BQ96K49 555 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 ANGEL1Q9UNK9 670 aaKnown RBP12.46□□□□□ -0.41
NEFM-202ENST00000433454 KDM4AO75164 1064 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 SLC3A2P08195 630 aaKnown RBP12.46□□□□□ -0.42
NEFM-202ENST00000433454 SBK1Q52WX2 424 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 RRP12Q5JTH9 1297 aaKnown RBP12.46□□□□□ -0.42
NEFM-202ENST00000433454 DACT2Q5SW24 774 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 CYB5R4Q7L1T6 521 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 AMOTL1Q8IY63 956 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 TEX11Q8IYF3 940 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 ZNF274Q96GC6 653 aaPredicted RBP12.46□□□□□ -0.42
NEFM-202ENST00000433454 VPS33BQ9H267 617 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 INCENPQ9NQS7 918 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 KCNQ5Q9NR82 932 aa12.46□□□□□ -0.42
NEFM-202ENST00000433454 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.42
NEFM-202ENST00000433454 PSME4Q14997 1843 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 CYP2D7A0A087X1C5 515 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 PFKFB2O60825 505 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 EVCP57679 992 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
NEFM-202ENST00000433454 NAP1L2Q9ULW6 460 aaPredicted RBP12.45□□□□□ -0.42
NEFM-202ENST00000433454 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 PKP1Q13835 747 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 SART3Q15020 963 aaKnown RBP12.45□□□□□ -0.42
NEFM-202ENST00000433454 STK11IPQ8N1F8 1099 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 LARGE2Q8N3Y3 721 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 ESR2Q92731 530 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 TEKT1Q969V4 418 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
NEFM-202ENST00000433454 ZSWIM5Q9P217 1185 aa12.45□□□□□ -0.42
NEFM-202ENST00000433454 DDX60LQ5H9U9 1706 aaKnown RBP12.44□□□□□ -0.42
NEFM-202ENST00000433454 FOCADQ5VW36 1801 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 SH2B2O14492 632 aaPredicted RBP12.44□□□□□ -0.42
NEFM-202ENST00000433454 GJB2P29033 226 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 RHBDL3P58872 404 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 HHIPL2Q6UWX4 724 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 CHMP4CQ96CF2 233 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 ZNF277Q9NRM2 450 aaPredicted RBP12.44□□□□□ -0.42
NEFM-202ENST00000433454 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 FGRP09769 529 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 PDIA3P30101 505 aaKnown RBP12.44□□□□□ -0.42
NEFM-202ENST00000433454 SCNN1DP51172 638 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 SCRN1Q12765 414 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 TMEM67Q5HYA8 995 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 MAPKAPK5Q8IW41 473 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 NKX2-3Q8TAU0 364 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 GBP4Q96PP9 640 aa12.44□□□□□ -0.42
NEFM-202ENST00000433454 ADAMTSL1Q8N6G6 1762 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 FER1L6Q2WGJ9 1857 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 YDJCA8MPS7 323 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 GOLGA8BA8MQT2 603 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 PDE4BQ07343 736 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 C12orf60Q5U649 245 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 KIAA0825Q8IV33 1275 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 ROBO3Q96MS0 1386 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 FLT1P17948 1338 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 ERICH2A1L162 156 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 SMIM22K7EJ46 135 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 IFIT3O14879 490 aaKnown RBP12.43□□□□□ -0.42
NEFM-202ENST00000433454 ORC4O43929 436 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 CYP2D6P10635 497 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 LIFRP42702 1097 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 HDLBPQ00341 1268 aaKnown RBP12.43□□□□□ -0.42
NEFM-202ENST00000433454 IGDCC4Q8TDY8 1250 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 LLPHQ9BRT6 129 aaKnown RBP12.43□□□□□ -0.42
NEFM-202ENST00000433454 UBAC1Q9BSL1 405 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 MRIQ9BWK5 157 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 TAOK3Q9H2K8 898 aa12.43□□□□□ -0.42
NEFM-202ENST00000433454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.43□□□□□ -0.42
NEFM-202ENST00000433454 WDR33Q9C0J8 1336 aaKnown RBP12.42□□□□□ -0.42
NEFM-202ENST00000433454 CRKP46108 304 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 LY9Q9HBG7 655 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 BRPF3Q9ULD4 1205 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 MYO3BQ8WXR4 1341 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 COL4A5P29400 1685 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
NEFM-202ENST00000433454 BRD1O95696 1058 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 POLR3DP05423 398 aaPredicted RBP12.42□□□□□ -0.42
NEFM-202ENST00000433454 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
NEFM-202ENST00000433454 NT5C2P49902 561 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 CCT2P78371 535 aaKnown RBP12.42□□□□□ -0.42
NEFM-202ENST00000433454 NFXL1Q6ZNB6 911 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 SGMS1Q86VZ5 419 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 NIM1KQ8IY84 436 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 ZDHHC15Q96MV8 337 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
NEFM-202ENST00000433454 MYH1P12882 1939 aa12.41□□□□□ -0.42
NEFM-202ENST00000433454 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
NEFM-202ENST00000433454 PRDM1O75626 825 aa12.41□□□□□ -0.42
NEFM-202ENST00000433454 PDIA4P13667 645 aaKnown RBP12.41□□□□□ -0.42
NEFM-202ENST00000433454 PDCP20941 246 aa12.41□□□□□ -0.42
NEFM-202ENST00000433454 SYT1P21579 422 aa12.41□□□□□ -0.42
NEFM-202ENST00000433454 EVX2Q03828 476 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms