RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 AKAP4Q5JQC9 854 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 AFAP1L1Q8TED9 768 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 COPRSQ9NQ92 184 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 TRDNQ13061 729 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 TRIM29Q14134 588 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 LMBR1LQ6UX01 489 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 MYCBPQ99417 103 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 GBP3Q9H0R5 595 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 YY1AP1Q9H869 796 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 GEMIN8Q9NWZ8 242 aaKnown RBP13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
HMGCS1-202ENST00000433297 AGLP35573 1532 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 TTC39AQ5SRH9 613 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 CACNA1FO60840 1977 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 CASP14P31944 242 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 POSTNQ15063 836 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 ZMYM1Q5SVZ6 1142 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 SLC9C2Q5TAH2 1124 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 OSBP2Q969R2 916 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 RAB21Q9UL25 225 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 HPSEQ9Y251 543 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 SETD1BQ9UPS6 1966 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 MNAT1P51948 309 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
HMGCS1-202ENST00000433297 ENC1O14682 589 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 GRIN1Q05586 938 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 MSANTD4Q8NCY6 345 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 PPFIA4O75335 1185 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 FGAP02671 866 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 AFMP43652 599 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 USP5P45974 858 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 CCT5P48643 541 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 RESP18Q5W5W9 173 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 LMOD2Q6P5Q4 547 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 NFXL1Q6ZNB6 911 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 CAPZA3Q96KX2 299 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 NAPGQ99747 312 aaPredicted RBP13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 NCAPGQ9BPX3 1015 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 APPP05067 770 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 CCT6AP40227 531 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 METAP2P50579 478 aaKnown RBP eCLIP13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 TTC19Q6DKK2 380 aaPredicted RBP13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 CCDC148Q8NFR7 591 aa13.14□□□□□ -0.31
HMGCS1-202ENST00000433297 CASP1P29466 404 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 PIP4K2BP78356 416 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 TADA2BQ86TJ2 420 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 GSPT2Q8IYD1 628 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 UTYO14607 1347 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 ZNF213O14771 459 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 PPP6R2O75170 966 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 NR1I3Q14994 352 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 PTPAQ15257 358 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 SMYD4Q8IYR2 804 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
HMGCS1-202ENST00000433297 EFCAB13Q8IY85 973 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 ERLIN2O94905 339 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 CDC25AP30304 524 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 MED4Q9NPJ6 270 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 LTKP29376 864 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 PDIA6Q15084 440 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 ARHGEF25Q86VW2 580 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 NUP88Q99567 741 aaPredicted RBP13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 HDAC6Q9UBN7 1215 aa13.12□□□□□ -0.31
HMGCS1-202ENST00000433297 PES1O00541 588 aaKnown RBP13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 RPS6KA5O75582 802 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 ZNF18P17022 549 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 ANTXR2P58335 489 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 SECISBP2LQ93073 1101 aaKnown RBP13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 NEO1Q92859 1461 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 MYO1BO43795 1136 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 SYF2O95926 243 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 508.8 ms