RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 LPIN2Q92539 896 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
SMPD4-206ENST00000433118 IMPACTQ9P2X3 320 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 PFKFB1P16118 471 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 MARCKSP29966 332 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-206ENST00000433118 ANTXR2P58335 489 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 TRDNQ13061 729 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
SMPD4-206ENST00000433118 RASGRF1Q13972 1273 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 ANO1Q5XXA6 986 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 CELF1Q92879 486 aaKnown RBP12.18□□□□□ -0.46
SMPD4-206ENST00000433118 OGFRQ9NZT2 677 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 DENND2AQ9ULE3 1009 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
SMPD4-206ENST00000433118 SLC5A1P13866 664 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMPD4-206ENST00000433118 ARHGEF1Q92888 912 aaKnown RBP12.18□□□□□ -0.46
SMPD4-206ENST00000433118 SETDB2Q96T68 719 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 OSBPL5Q9H0X9 879 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-206ENST00000433118 JAG2Q9Y219 1238 aa12.18□□□□□ -0.46
SMPD4-206ENST00000433118 GYG1P46976 350 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 KIF23Q02241 960 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-206ENST00000433118 FAM196AQ6ZSG2 479 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 QTRT2Q9H974 415 aaKnown RBP12.17□□□□□ -0.46
SMPD4-206ENST00000433118 ABCF2Q9UG63 623 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 NRDCO43847 1150 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 NLRP12P59046 1061 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 CCDC150Q8NCX0 1101 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 SPATA31A6Q5VVP1 1343 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 MROH5Q6ZUA9 1318 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 IGSF3O75054 1194 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 RXRAP19793 462 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 LMOD1P29536 600 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-206ENST00000433118 MAGEB6Q8N7X4 407 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 AIFM3Q96NN9 605 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■■□□ 17.9
SMPD4-206ENST00000433118 NEDD4P46934 1319 aa12.17□□□□□ -0.46
SMPD4-206ENST00000433118 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 KIF2AO00139 706 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-206ENST00000433118 CMA1P23946 247 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 SPATA5Q8NB90 893 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 INCENPQ9NQS7 918 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 LRRC4BQ9NT99 713 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 TAF1P21675 1872 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 FGFR2P21802 821 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 RFC4P35249 363 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 METAP2P50579 478 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMPD4-206ENST00000433118 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 ANKRD18AQ8IVF6 992 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 MIGA1Q8NAN2 632 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 ERO1AQ96HE7 468 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 MROH7-TTC4A0A0A0MT08 1334 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 RPS6KA4O75676 772 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 WDHD1O75717 1129 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-206ENST00000433118 SYKP43405 635 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 ELF2Q15723 593 aa12.16□□□□□ -0.46
SMPD4-206ENST00000433118 AXDND1Q5T1B0 1012 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-206ENST00000433118 E4F1Q66K89 784 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-206ENST00000433118 TRIM37O94972 964 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 SLU7O95391 586 aaKnown RBP12.15□□□□□ -0.46
SMPD4-206ENST00000433118 PDE6AP16499 860 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 KLRK1P26718 216 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 VPS37DQ86XT2 251 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 ZNF397Q8NF99 534 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-206ENST00000433118 DDX41Q9UJV9 622 aaKnown RBP12.15□□□□□ -0.46
SMPD4-206ENST00000433118 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
SMPD4-206ENST00000433118 COL4A1P02462 1669 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 MYH3P11055 1940 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 ADD2P35612 726 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 SLC39A14Q15043 492 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 CLEC4GQ6UXB4 293 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 PPP1R13BQ96KQ4 1090 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 AK7Q96M32 723 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 CDC5LQ99459 802 aaKnown RBP12.15□□□□□ -0.46
SMPD4-206ENST00000433118 NARFQ9UHQ1 456 aa12.15□□□□□ -0.46
SMPD4-206ENST00000433118 ANKRD36CQ5JPF3 1778 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 FANCCQ00597 558 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 CPLX2Q6PUV4 134 aaKnown RBP12.14□□□□□ -0.47
SMPD4-206ENST00000433118 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 PHKBQ93100 1093 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 AIDAQ96BJ3 306 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 ZMYM6O95789 1325 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 CDKL5O76039 1030 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 ATP1A3P13637 1013 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 NCAPHQ15003 741 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 KRT40Q6A162 431 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 SYT10Q6XYQ8 523 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 JMYQ8N9B5 988 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 KCND1Q9NSA2 647 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 LRP2BPQ9P2M1 347 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 TRPC5Q9UL62 973 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-206ENST00000433118 MYH7P12883 1935 aa12.14□□□□□ -0.47
SMPD4-206ENST00000433118 PRKAB2O43741 272 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms