RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 UBE2OQ9C0C9 1292 aaKnown RBP12.31□□□□□ -0.44
CCDC171-202ENST00000432954 TAOK3Q9H2K8 898 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 SSX2IPQ9Y2D8 614 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 TIMM22Q9Y584 194 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
CCDC171-202ENST00000432954 KIAA0754O94854 1291 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 TMCC1O94876 653 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 PDGFRBP09619 1106 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 ATP5JP18859 108 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 HOXD12P35452 270 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 PDE6BP35913 854 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 PSMC4P43686 418 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 DRP2Q13474 957 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 ZNF280CQ8ND82 737 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 SMARCC2Q8TAQ2 1214 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 TCHPQ9BT92 498 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 PAGR1Q9BTK6 254 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 TPCN1Q9ULQ1 816 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 NAIPQ13075 1403 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 ERBINQ96RT1 1412 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 TARSL2A2RTX5 802 aaKnown RBP12.3□□□□□ -0.44
CCDC171-202ENST00000432954 GOLGA6L4A6NEF3 574 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 PPP1R12BO60237 982 aaPredicted RBP12.3□□□□□ -0.44
CCDC171-202ENST00000432954 TROVE2P10155 538 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC171-202ENST00000432954 CNGA1P29973 690 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 DMPKQ09013 629 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 CDK5RAP3Q96JB5 506 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 GSDMAQ96QA5 445 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 WDR35Q9P2L0 1181 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 CIDEBQ9UHD4 219 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 HOOK1Q9UJC3 728 aaKnown RBP12.3□□□□□ -0.44
CCDC171-202ENST00000432954 PHLPP2Q6ZVD8 1323 aa12.3□□□□□ -0.44
CCDC171-202ENST00000432954 MEFVO15553 781 aaPredicted RBP12.29□□□□□ -0.44
CCDC171-202ENST00000432954 SMIM24O75264 130 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 ADRA2BP18089 450 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 NUCB1Q02818 461 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 MAP7D1Q3KQU3 841 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 PPP1R15BQ5SWA1 713 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 AFAP1L1Q8TED9 768 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 HPS3Q969F9 1004 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 VMP1Q96GC9 406 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 INO80BQ9C086 356 aaPredicted RBP12.29□□□□□ -0.44
CCDC171-202ENST00000432954 DHX36Q9H2U1 1008 aaKnown RBP12.29□□□□□ -0.44
CCDC171-202ENST00000432954 IFT122Q9HBG6 1241 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 DYTNA2CJ06 578 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 ABLIM1O14639 778 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 TBC1D12O60347 775 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 ATP4AP20648 1035 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
CCDC171-202ENST00000432954 LRRFIP1Q32MZ4 808 aaKnown RBP12.29□□□□□ -0.44
CCDC171-202ENST00000432954 C4orf46Q504U0 113 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 LRRC8AQ8IWT6 810 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 KRI1Q8N9T8 703 aaKnown RBP12.29□□□□□ -0.44
CCDC171-202ENST00000432954 TMEM87AQ8NBN3 555 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 RABGGTAQ92696 567 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 NAP1L3Q99457 506 aaPredicted RBP12.29□□□□□ -0.44
CCDC171-202ENST00000432954 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 TNMDQ9H2S6 317 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 SLC40A1Q9NP59 571 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 DNAJC5BQ9UF47 199 aa12.29□□□□□ -0.44
CCDC171-202ENST00000432954 FAM25EA8MYX2 175 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 BIN1O00499 593 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 TTI1O43156 1089 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 EVCP57679 992 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 UPF3BQ9BZI7 483 aaKnown RBP12.28□□□□□ -0.44
CCDC171-202ENST00000432954 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 MAP3K20Q9NYL2 800 aaKnown RBP12.28□□□□□ -0.44
CCDC171-202ENST00000432954 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 E9PCH4 1651 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 TMEM247A6NEH6 219 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 NDUFB5O43674 189 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 NPTXRO95502 500 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 ENDOUP21128 410 aaKnown RBP12.28□□□□□ -0.44
CCDC171-202ENST00000432954 USP5P45974 858 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 ZNF75DP51815 510 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 SH3BGRP55822 239 aaPredicted RBP12.28□□□□□ -0.44
CCDC171-202ENST00000432954 INAQ16352 499 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
CCDC171-202ENST00000432954 ARHGAP27Q6ZUM4 889 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 WAPLQ7Z5K2 1190 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 BPHLQ86WA6 291 aaPredicted RBP12.28□□□□□ -0.44
CCDC171-202ENST00000432954 TTC39CQ8N584 583 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 OPTNQ96CV9 577 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 ZMAT2Q96NC0 199 aaKnown RBP12.28□□□□□ -0.44
CCDC171-202ENST00000432954 C2orf49Q9BVC5 232 aaPredicted RBP12.28□□□□□ -0.44
CCDC171-202ENST00000432954 RABEP2Q9H5N1 569 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 PREBQ9HCU5 417 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 IGSF5Q9NSI5 407 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 PCMTD2Q9NV79 361 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 CARD8Q9Y2G2 431 aa12.28□□□□□ -0.44
CCDC171-202ENST00000432954 ABCC11Q96J66 1382 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms