RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 OSBP2Q969R2 916 aa15.03■□□□□ -0
USP40-205ENST00000430158 CDCA5Q96FF9 252 aa15.03■□□□□ -0
USP40-205ENST00000430158 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.03■□□□□ -0
USP40-205ENST00000430158 VEZTQ9HBM0 779 aa15.03■□□□□ -0
USP40-205ENST00000430158 AATFQ9NY61 560 aaKnown RBP eCLIP15.03■□□□□ -0
USP40-205ENST00000430158 MKRN1Q9UHC7 482 aaKnown RBP15.03■□□□□ -0
USP40-205ENST00000430158 GALR2O43603 387 aaPredicted RBP15.02■□□□□ -0
USP40-205ENST00000430158 SH3BP5LQ7L8J4 393 aa15.02■□□□□ -0
USP40-205ENST00000430158 MIGA1Q8NAN2 632 aa15.02■□□□□ -0
USP40-205ENST00000430158 TMEM39BQ9GZU3 492 aa15.02■□□□□ -0
USP40-205ENST00000430158 PUS7LQ9H0K6 701 aaKnown RBP15.02■□□□□ -0
USP40-205ENST00000430158 PPP2R3BQ9Y5P8 575 aa15.02■□□□□ -0
USP40-205ENST00000430158 RPAP1Q9BWH6 1393 aaPredicted RBP15.01□□□□□ -0.01
USP40-205ENST00000430158 ENTPD3O75355 529 aa15.01□□□□□ -0.01
USP40-205ENST00000430158 BAG3O95817 575 aa15.01□□□□□ -0.01
USP40-205ENST00000430158 ZFYP08048 801 aaPredicted RBP15.01□□□□□ -0.01
USP40-205ENST00000430158 RGS3P49796 1198 aa15.01□□□□□ -0.01
USP40-205ENST00000430158 ZMYM1Q5SVZ6 1142 aa15.01□□□□□ -0.01
USP40-205ENST00000430158 ZSCAN25Q6NSZ9 544 aa15.01□□□□□ -0.01
USP40-205ENST00000430158 LCORLQ8N3X6 602 aa15.01□□□□□ -0.01
USP40-205ENST00000430158 FAM151AQ8WW52 585 aa15.01□□□□□ -0.01
USP40-205ENST00000430158 SIPA1L1O43166 1804 aa15.01□□□□□ -0.01
USP40-205ENST00000430158 ATRNL1Q5VV63 1379 aa15□□□□□ -0.01
USP40-205ENST00000430158 MYH1P12882 1939 aa15□□□□□ -0.01
USP40-205ENST00000430158 MAGEB6P1A0A0J9YX57 407 aa15□□□□□ -0.01
USP40-205ENST00000430158 PLCG2P16885 1265 aa15□□□□□ -0.01
USP40-205ENST00000430158 SDSP20132 328 aa15□□□□□ -0.01
USP40-205ENST00000430158 TNFAIP1Q13829 316 aa15□□□□□ -0.01
USP40-205ENST00000430158 NBPF12Q5TAG4 269 aaPredicted RBP15□□□□□ -0.01
USP40-205ENST00000430158 TEX11Q8IYF3 940 aa15□□□□□ -0.01
USP40-205ENST00000430158 APPBP2Q92624 585 aa15□□□□□ -0.01
USP40-205ENST00000430158 FSD1Q9BTV5 496 aa15□□□□□ -0.01
USP40-205ENST00000430158 COL2A1P02458 1487 aaPredicted RBP15□□□□□ -0.01
USP40-205ENST00000430158 DDX60LQ5H9U9 1706 aaKnown RBP15□□□□□ -0.01
USP40-205ENST00000430158 PAPPA2Q9BXP8 1791 aa14.99□□□□□ -0.01
USP40-205ENST00000430158 M0R2C6 588 aa14.99□□□□□ -0.01
USP40-205ENST00000430158 APLP1P51693 650 aa14.99□□□□□ -0.01
USP40-205ENST00000430158 TCP10Q12799 353 aa14.99□□□□□ -0.01
USP40-205ENST00000430158 CERS3Q8IU89 383 aa14.99□□□□□ -0.01
USP40-205ENST00000430158 STRBPQ96SI9 672 aaKnown RBP14.99□□□□□ -0.01
USP40-205ENST00000430158 SEC62Q99442 399 aaKnown RBP14.99□□□□□ -0.01
USP40-205ENST00000430158 ARMT1Q9H993 441 aa14.99□□□□□ -0.01
USP40-205ENST00000430158 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
USP40-205ENST00000430158 BAZ2AQ9UIF9 1905 aaKnown RBP14.99□□□□□ -0.01
USP40-205ENST00000430158 FLT1P17948 1338 aa14.98□□□□□ -0.01
USP40-205ENST00000430158 DDTLA6NHG4 134 aaPredicted RBP14.98□□□□□ -0.01
USP40-205ENST00000430158 TRIM6-TRIM34B2RNG4 842 aa14.98□□□□□ -0.01
USP40-205ENST00000430158 FOXP2O15409 715 aa14.98□□□□□ -0.01
USP40-205ENST00000430158 PRKAB2O43741 272 aa14.98□□□□□ -0.01
USP40-205ENST00000430158 MBD4O95243 580 aa14.98□□□□□ -0.01
USP40-205ENST00000430158 CELF2O95319 508 aaKnown RBP14.98□□□□□ -0.01
USP40-205ENST00000430158 MAP3K10Q02779 954 aa14.98□□□□□ -0.01
USP40-205ENST00000430158 TGFBRAP1Q8WUH2 860 aa14.98□□□□□ -0.01
USP40-205ENST00000430158 OSBPL5Q9H0X9 879 aaPredicted RBP14.98□□□□□ -0.01
USP40-205ENST00000430158 A0A0D9SFI3 127 aa14.97□□□□□ -0.01
USP40-205ENST00000430158 HSPA6P17066 643 aa14.97□□□□□ -0.01
USP40-205ENST00000430158 TNNI2P48788 182 aa14.97□□□□□ -0.01
USP40-205ENST00000430158 MAP3K11Q16584 847 aa14.97□□□□□ -0.01
USP40-205ENST00000430158 MAPKAPK5Q8IW41 473 aa14.97□□□□□ -0.01
USP40-205ENST00000430158 RILPL2Q969X0 211 aa14.97□□□□□ -0.01
USP40-205ENST00000430158 FAM227BQ96M60 508 aa14.97□□□□□ -0.01
USP40-205ENST00000430158 NOL10Q9BSC4 688 aaKnown RBP14.97□□□□□ -0.01
USP40-205ENST00000430158 TMEM88BA6NKF7 163 aa14.96□□□□□ -0.01
USP40-205ENST00000430158 SLURP2P0DP57 97 aa14.96□□□□□ -0.01
USP40-205ENST00000430158 NMIQ13287 307 aaPredicted RBP14.96□□□□□ -0.01
USP40-205ENST00000430158 PICALMQ13492 652 aa14.96□□□□□ -0.01
USP40-205ENST00000430158 LRRFIP1Q32MZ4 808 aaKnown RBP14.96□□□□□ -0.01
USP40-205ENST00000430158 BMP2KLQ5H9B9 411 aa14.96□□□□□ -0.01
USP40-205ENST00000430158 MOB2Q70IA6 237 aa14.96□□□□□ -0.01
USP40-205ENST00000430158 METTL16Q86W50 562 aaKnown RBP14.96□□□□□ -0.01
USP40-205ENST00000430158 NAV1Q8NEY1 1877 aa14.96□□□□□ -0.01
USP40-205ENST00000430158 HELLSQ9NRZ9 838 aa14.96□□□□□ -0.01
USP40-205ENST00000430158 OTOFQ9HC10 1997 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 GSG1L2A8MUP6 293 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 GPAA1O43292 621 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 USP2O75604 605 aaPredicted RBP14.95□□□□□ -0.02
USP40-205ENST00000430158 SUPT20HL1Q3ZLR7 823 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 LDLRAD1Q5T700 205 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 SAPCD2Q86UD0 394 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 SDR42E1Q8WUS8 393 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 CRNKL1Q9BZJ0 848 aaKnown RBP14.95□□□□□ -0.02
USP40-205ENST00000430158 IL25Q9H293 177 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 GBA2Q9HCG7 927 aaPredicted RBP14.95□□□□□ -0.02
USP40-205ENST00000430158 DCP1AQ9NPI6 582 aaPredicted RBP14.95□□□□□ -0.02
USP40-205ENST00000430158 FZD1Q9UP38 647 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 TLL2Q9Y6L7 1015 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 CEP350Q5VT06 3117 aa14.95□□□□□ -0.02
USP40-205ENST00000430158 CHMLP26374 656 aa14.94□□□□□ -0.02
USP40-205ENST00000430158 FKBP1BP68106 108 aa14.94□□□□□ -0.02
USP40-205ENST00000430158 CCDC129Q6ZRS4 1044 aa14.94□□□□□ -0.02
USP40-205ENST00000430158 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
USP40-205ENST00000430158 AIDAQ96BJ3 306 aa14.94□□□□□ -0.02
USP40-205ENST00000430158 EPB41L4AQ9HCS5 686 aaPredicted RBP14.94□□□□□ -0.02
USP40-205ENST00000430158 ZNF112Q9UJU3 913 aa14.94□□□□□ -0.02
USP40-205ENST00000430158 PHF20L1A8MW92 1017 aa14.93□□□□□ -0.02
USP40-205ENST00000430158 POTEB2H3BUK9 544 aa14.93□□□□□ -0.02
USP40-205ENST00000430158 TBC1D12O60347 775 aa14.93□□□□□ -0.02
USP40-205ENST00000430158 HTRA3P83110 453 aa14.93□□□□□ -0.02
USP40-205ENST00000430158 MCMDC2Q4G0Z9 681 aa14.93□□□□□ -0.02
USP40-205ENST00000430158 OTUD5Q96G74 571 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms