RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 KINO60870 393 aaKnown RBP10.14□□□□□ -0.79
GABPB1-205ENST00000429662 NR1I2O75469 434 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 ITGBL1O95965 494 aaPredicted RBP10.14□□□□□ -0.79
GABPB1-205ENST00000429662 TPRNQ4KMQ1 711 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 GPR153Q6NV75 609 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 LUZP1Q86V48 1076 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 CKAP2LQ8IYA6 745 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 VSIG10Q8N0Z9 540 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 TCEANC2Q96MN5 208 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 KCNF1Q9H3M0 494 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 CACNA1SQ13698 1873 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 LAMB4A4D0S4 1761 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 CARMIL3Q8ND23 1372 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 PTPDC1A2A3K4 754 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 E7EWF7 191 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 POLRMTO00411 1230 aaKnown RBP10.14□□□□□ -0.79
GABPB1-205ENST00000429662 IFIT1P09914 478 aaKnown RBP10.14□□□□□ -0.79
GABPB1-205ENST00000429662 ADD1P35611 737 aaKnown RBP10.14□□□□□ -0.79
GABPB1-205ENST00000429662 ATP6V1AP38606 617 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 FAM160A1Q05DH4 1040 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 CCDC158Q5M9N0 1113 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 FAM173BQ6P4H8 233 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 DDX46Q7L014 1031 aaKnown RBP10.14□□□□□ -0.79
GABPB1-205ENST00000429662 ATG9AQ7Z3C6 839 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 CCAR1Q8IX12 1150 aaKnown RBP10.14□□□□□ -0.79
GABPB1-205ENST00000429662 SMAP1Q8IYB5 467 aaPredicted RBP10.14□□□□□ -0.79
GABPB1-205ENST00000429662 SPC24Q8NBT2 197 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 CEP126Q9P2H0 1117 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 TAF6LQ9Y6J9 622 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 CASP8AP2Q9UKL3 1982 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 SALL1Q9NSC2 1324 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 RASSF10A6NK89 507 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 SMTNL1A8MU46 457 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 BECN2A8MW95 431 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 KIF2AO00139 706 aaPredicted RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 GOLIM4O00461 696 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 CTIFO43310 598 aaKnown RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 TUBB4AP04350 444 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 HSPD1P10809 573 aaKnown RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 PTGS1P23219 599 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 TM4SF1P30408 202 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 GSDMDP57764 484 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 IQCB1Q15051 598 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 IMMTQ16891 758 aaKnown RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 RC3H1Q5TC82 1133 aaKnown RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 ZSCAN25Q6NSZ9 544 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 CCDC129Q6ZRS4 1044 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 CCDC186Q7Z3E2 898 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 BRAPQ7Z569 592 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 FBXO22Q8NEZ5 403 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 KCNG4Q8TDN1 519 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 EDC3Q96F86 508 aaKnown RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 BPIFA3Q9BQP9 254 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 TEX13AQ9BXU3 409 aaPredicted RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 KCND1Q9NSA2 647 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 RTEL1Q9NZ71 1219 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 CLIP2Q9UDT6 1046 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 SRP68Q9UHB9 627 aaKnown RBP10.13□□□□□ -0.79
GABPB1-205ENST00000429662 PYCARDQ9ULZ3 195 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 CHMP3Q9Y3E7 222 aa10.13□□□□□ -0.79
GABPB1-205ENST00000429662 ATP5J2-PTCD1G3V325 749 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 PTCD1O75127 700 aaKnown RBP10.12□□□□□ -0.79
GABPB1-205ENST00000429662 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 YEATS4O95619 227 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
GABPB1-205ENST00000429662 TPM4P67936 248 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 ADALQ6DHV7 355 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 STOX1Q6ZVD7 989 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 CEP57L1Q8IYX8 460 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 PDCL2Q8N4E4 241 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 ENGASEQ8NFI3 743 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 DDX11Q96FC9 970 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 PLA2G12BQ9BX93 195 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 DNAJC25Q9H1X3 360 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 IMPACTQ9P2X3 320 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 RTCBQ9Y3I0 505 aaKnown RBP10.12□□□□□ -0.79
GABPB1-205ENST00000429662 PARP3Q9Y6F1 533 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 HTTP42858 3142 aa10.12□□□□□ -0.79
GABPB1-205ENST00000429662 SLX4Q8IY92 1834 aa10.11□□□□□ -0.79
GABPB1-205ENST00000429662 BRCA2P51587 3418 aa10.11□□□□□ -0.79
GABPB1-205ENST00000429662 CCDC85CA6NKD9 419 aa10.11□□□□□ -0.79
GABPB1-205ENST00000429662 NRDCO43847 1150 aa10.11□□□□□ -0.79
GABPB1-205ENST00000429662 CTDNEP1O95476 244 aa10.11□□□□□ -0.79
GABPB1-205ENST00000429662 APOBRQ0VD83 1088 aa10.11□□□□□ -0.79
GABPB1-205ENST00000429662 ZRSR1Q15695 479 aaKnown RBP10.11□□□□□ -0.79
GABPB1-205ENST00000429662 CCDC57Q2TAC2 916 aa10.11□□□□□ -0.79
GABPB1-205ENST00000429662 MRPS27Q92552 414 aaKnown RBP10.11□□□□□ -0.79
GABPB1-205ENST00000429662 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
GABPB1-205ENST00000429662 MAST3O60307 1309 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 A0A1B0GUL7 405 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 NBPF26B4DH59 902 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 MYO1BO43795 1136 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 CDKL5O76039 1030 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 ME1P48163 572 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 SNW1Q13573 536 aaKnown RBP10.1□□□□□ -0.79
GABPB1-205ENST00000429662 TTC39AQ5SRH9 613 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 GORABQ5T7V8 394 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms