RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 RGPD8O14715 1765 aaPredicted RBP16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 PSDA5PKW4 1024 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 LARP6Q9BRS8 491 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 GOPCQ9HD26 462 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 NECAB1Q8N987 351 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 G3V3G9 751 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 RPSAP08865 295 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 KIF4BQ2VIQ3 1234 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 DCAF8Q5TAQ9 597 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 BCAS4Q8TDM0 211 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 MICAL1Q8TDZ2 1067 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 METTL22Q9BUU2 404 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 ZRANB2O95218 330 aaKnown RBP eCLIP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 KIF4AO95239 1232 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 STK38Q15208 465 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 PDCD2Q16342 344 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 EPC1Q9H2F5 836 aa16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 PUF60Q9UHX1 559 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-203ENST00000428982 KLHL33A6NCF5 533 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 NDUFAB1O14561 156 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 PLA2G4DQ86XP0 818 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 TFIP11Q9UBB9 837 aaKnown RBP16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 NRKQ7Z2Y5 1582 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 ME1P48163 572 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 IFIT5Q13325 482 aaKnown RBP16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 CLSTN2Q9H4D0 955 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 RHOXF2BP0C7M4 288 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 CHMP4BP1P59074 171 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 RHOXF2Q9BQY4 288 aa16.35■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC189A1A4V9 331 aa16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 RPS6KB1P23443 525 aa16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 TXLNAP40222 546 aa16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 BEND3Q5T5X7 828 aa16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 RALYLQ86SE5 291 aaKnown RBP16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 IL17RAQ96F46 866 aa16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 L2HGDHQ9H9P8 463 aa16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
SYNGAP1-203ENST00000428982 CEBPZQ03701 1054 aaKnown RBP16.33■□□□□ 0.21
SYNGAP1-203ENST00000428982 TRIM29Q14134 588 aa16.33■□□□□ 0.21
SYNGAP1-203ENST00000428982 PI4K2BQ8TCG2 481 aa16.33■□□□□ 0.21
SYNGAP1-203ENST00000428982 PHLPP2Q6ZVD8 1323 aa16.33■□□□□ 0.21
SYNGAP1-203ENST00000428982 SLC27A2O14975 620 aa16.33■□□□□ 0.21
SYNGAP1-203ENST00000428982 CBFA2T2O43439 604 aa16.33■□□□□ 0.21
SYNGAP1-203ENST00000428982 MCM3P25205 808 aa16.33■□□□□ 0.21
SYNGAP1-203ENST00000428982 LLPHQ9BRT6 129 aaKnown RBP16.33■□□□□ 0.21
SYNGAP1-203ENST00000428982 ARMCX6Q7L4S7 300 aa16.33■□□□□ 0.2
SYNGAP1-203ENST00000428982 TTC14Q96N46 770 aa16.33■□□□□ 0.2
SYNGAP1-203ENST00000428982 IMPACTQ9P2X3 320 aa16.33■□□□□ 0.2
SYNGAP1-203ENST00000428982 REXO1L1PQ8IX06 675 aa16.33■□□□□ 0.2
SYNGAP1-203ENST00000428982 AOPEPQ8N6M6 819 aa16.33■□□□□ 0.2
SYNGAP1-203ENST00000428982 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
SYNGAP1-203ENST00000428982 SPATA31A6Q5VVP1 1343 aa16.33■□□□□ 0.2
SYNGAP1-203ENST00000428982 TADA3O75528 432 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 CFAP100Q494V2 611 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 NFXL1Q6ZNB6 911 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 UTP14AQ9BVJ6 771 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 MRFAP1Q9Y605 127 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 PIK3C2AO00443 1686 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 SALL3Q9BXA9 1300 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 TUBB4BP68371 445 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 SNCBQ16143 134 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 CPP00450 1065 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 TUBBP07437 444 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 NBPF7P0C2Y1 421 aaPredicted RBP16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 E2F5Q15329 346 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 LRRC31Q6UY01 552 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 TOPAZ1Q8N9V7 1692 aa16.32■□□□□ 0.2
SYNGAP1-203ENST00000428982 KIF5CO60282 957 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 ADCY2Q08462 1091 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 RFC4P35249 363 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 DBN1Q16643 649 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 SNUPNO95149 360 aaKnown RBP16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 PDE6BP35913 854 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 RBM5P52756 815 aaKnown RBP eCLIP16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 MTX1Q13505 466 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 RASEFQ8IZ41 740 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 KIF9Q9HAQ2 790 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 CCDC87Q9NVE4 849 aa16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 TOP1P11387 765 aaKnown RBP16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 ACTN3Q08043 901 aaPredicted RBP16.31■□□□□ 0.2
SYNGAP1-203ENST00000428982 ENO4A6NNW6 628 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 TTC39AQ5SRH9 613 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 AKAP2Q9Y2D5 859 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 PRAMEF22A3QJZ6 481 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 RNF40O75150 1001 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 SASH3O75995 380 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms