RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 LARGE1O95461 756 aa11.35□□□□□ -0.59
HMGCLL1-206ENST00000428842 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
HMGCLL1-206ENST00000428842 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
HMGCLL1-206ENST00000428842 TEKT1Q969V4 418 aa11.35□□□□□ -0.59
HMGCLL1-206ENST00000428842 LAMA4Q16363 1823 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 B4E1Z4 1266 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 E7EWF7 191 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 KDM4AO75164 1064 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 FMR1Q06787 632 aaKnown RBP eCLIP11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 FAM47AQ5JRC9 791 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 RASGRP2Q7LDG7 609 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 CNOT7Q9UIV1 285 aaKnown RBP11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 BAZ2BQ9UIF8 2168 aaKnown RBP11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 GPR75-ASB3A0A0A6YYF3 556 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 DDTLA6NHG4 134 aaPredicted RBP11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 WNT10BO00744 389 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 RXRAP19793 462 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 SH3BP5LQ7L8J4 393 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 TMEM39BQ9GZU3 492 aa11.34□□□□□ -0.59
HMGCLL1-206ENST00000428842 FLT1P17948 1338 aa11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 STK3Q13188 491 aa11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 CYB5R4Q7L1T6 521 aa11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 FAM198AQ9UFP1 575 aa11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 MTMR7Q9Y216 660 aa11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 PDS5AQ29RF7 1337 aaKnown RBP11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 ZNF213O14771 459 aa11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 DSCC1Q9BVC3 393 aa11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 MYOZ2Q9NPC6 264 aa11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
HMGCLL1-206ENST00000428842 GAKO14976 1311 aa11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 EIF6P56537 245 aaKnown RBP11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 PRKG1Q13976 671 aa11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 MIGA2Q7L4E1 593 aa11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 CCDC84Q86UT8 332 aaPredicted RBP11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 ZSCAN29Q8IWY8 852 aaPredicted RBP11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 OGFOD1Q8N543 542 aa11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 MYL10Q9BUA6 226 aa11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 PSME4Q14997 1843 aa11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 RFX7Q2KHR2 1363 aa11.32□□□□□ -0.6
HMGCLL1-206ENST00000428842 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 AK2P54819 239 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 PPARAQ07869 468 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 CRNKL1Q9BZJ0 848 aaKnown RBP11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 MYH1P12882 1939 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 ANTXR2P58335 489 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 DLGAP5Q15398 846 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 CCDC144CPQ8IYA2 1237 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 SLKQ9H2G2 1235 aaPredicted RBP11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 U3KPZ7 1027 aaPredicted RBP11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
HMGCLL1-206ENST00000428842 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 LRRFIP1Q32MZ4 808 aaKnown RBP11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 HTTP42858 3142 aa11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 BAG3O95817 575 aa11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 ZKSCAN1P17029 563 aaPredicted RBP11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 JAG1P78504 1218 aa11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 ZSWIM5Q9P217 1185 aa11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 RPAP1Q9BWH6 1393 aaPredicted RBP11.3□□□□□ -0.6
HMGCLL1-206ENST00000428842 RANBP6O60518 1105 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 GSTO1P78417 241 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 DNAJC18Q9H819 358 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 NCOA5Q9HCD5 579 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 ZNF70Q9UC06 446 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 UBE2Q2LH0YL09 131 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 MCCP23508 829 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 TOB2Q14106 344 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 ANGEL2Q5VTE6 544 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 HHIPL2Q6UWX4 724 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 Q6ZUG5 572 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 BRF1Q92994 677 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 HACL1Q9UJ83 578 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 SERPINA10Q9UK55 444 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 ECM29Q5VYK3 1845 aa11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 MKI67P46013 3256 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-206ENST00000428842 GDF11O95390 407 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 LDHCP07864 332 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 PPP4CP60510 307 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 TNIP1Q15025 636 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 EAPPQ56P03 285 aaPredicted RBP11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms