RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 ZKSCAN4Q969J2 545 aaPredicted RBP18.34■□□□□ 0.53
IMP4-204ENST00000428740 OTUD5Q96G74 571 aa18.34■□□□□ 0.53
IMP4-204ENST00000428740 SNCAIPQ9Y6H5 919 aa18.34■□□□□ 0.53
IMP4-204ENST00000428740 IGF2BP3O00425 579 aaKnown RBP eCLIP18.33■□□□□ 0.52
IMP4-204ENST00000428740 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
IMP4-204ENST00000428740 RHBDL3P58872 404 aa18.33■□□□□ 0.52
IMP4-204ENST00000428740 MAP3K10Q02779 954 aa18.33■□□□□ 0.52
IMP4-204ENST00000428740 PPIL2Q13356 520 aa18.33■□□□□ 0.52
IMP4-204ENST00000428740 SNAPC2Q13487 334 aa18.33■□□□□ 0.52
IMP4-204ENST00000428740 AACSQ86V21 672 aa18.33■□□□□ 0.52
IMP4-204ENST00000428740 CERS3Q8IU89 383 aa18.33■□□□□ 0.52
IMP4-204ENST00000428740 ZFPM1Q8IX07 1006 aa18.33■□□□□ 0.52
IMP4-204ENST00000428740 ZCCHC17Q9NP64 241 aaKnown RBP18.33■□□□□ 0.52
IMP4-204ENST00000428740 CCL15-CCL14A0A0B4J2E2 113 aa18.32■□□□□ 0.52
IMP4-204ENST00000428740 ZAP70P43403 619 aa18.32■□□□□ 0.52
IMP4-204ENST00000428740 PPP4CP60510 307 aa18.32■□□□□ 0.52
IMP4-204ENST00000428740 CCL15Q16663 113 aa18.32■□□□□ 0.52
IMP4-204ENST00000428740 NOL9Q5SY16 702 aaKnown RBP18.32■□□□□ 0.52
IMP4-204ENST00000428740 ZNF384Q8TF68 577 aa18.32■□□□□ 0.52
IMP4-204ENST00000428740 CCDC85CA6NKD9 419 aa18.31■□□□□ 0.52
IMP4-204ENST00000428740 TBC1D12O60347 775 aa18.31■□□□□ 0.52
IMP4-204ENST00000428740 INPP5BP32019 993 aa18.31■□□□□ 0.52
IMP4-204ENST00000428740 PICALMQ13492 652 aa18.31■□□□□ 0.52
IMP4-204ENST00000428740 PTPN18Q99952 460 aa18.31■□□□□ 0.52
IMP4-204ENST00000428740 ZFYVE28Q9HCC9 887 aa18.31■□□□□ 0.52
IMP4-204ENST00000428740 IRF6O14896 467 aa18.3■□□□□ 0.52
IMP4-204ENST00000428740 IFIT2P09913 472 aaKnown RBP18.3■□□□□ 0.52
IMP4-204ENST00000428740 ARHGEF6Q15052 776 aa18.3■□□□□ 0.52
IMP4-204ENST00000428740 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
IMP4-204ENST00000428740 SIRT2Q8IXJ6 389 aa18.3■□□□□ 0.52
IMP4-204ENST00000428740 TEX11Q8IYF3 940 aa18.3■□□□□ 0.52
IMP4-204ENST00000428740 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
IMP4-204ENST00000428740 BRI3BPQ8WY22 251 aa18.3■□□□□ 0.52
IMP4-204ENST00000428740 DHX36Q9H2U1 1008 aaKnown RBP18.3■□□□□ 0.52
IMP4-204ENST00000428740 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
IMP4-204ENST00000428740 PICK1Q9NRD5 415 aa18.3■□□□□ 0.52
IMP4-204ENST00000428740 TLR7Q9NYK1 1049 aaKnown RBP18.3■□□□□ 0.52
IMP4-204ENST00000428740 CASP8AP2Q9UKL3 1982 aa18.3■□□□□ 0.52
IMP4-204ENST00000428740 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
IMP4-204ENST00000428740 CTNND1O60716 968 aaKnown RBP18.29■□□□□ 0.52
IMP4-204ENST00000428740 MAP3K12Q12852 859 aa18.29■□□□□ 0.52
IMP4-204ENST00000428740 ERO1AQ96HE7 468 aa18.29■□□□□ 0.52
IMP4-204ENST00000428740 IL1RAPL2Q9NP60 686 aa18.29■□□□□ 0.52
IMP4-204ENST00000428740 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
IMP4-204ENST00000428740 MYH2Q9UKX2 1941 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 PHF20L1A8MW92 1017 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 CXCL11O14625 94 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 CRHR2Q13324 411 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 SH3BP5LQ7L8J4 393 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 SCYL3Q8IZE3 742 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
IMP4-204ENST00000428740 OSBPL5Q9H0X9 879 aaPredicted RBP18.28■□□□□ 0.52
IMP4-204ENST00000428740 R3HDMLQ9H3Y0 253 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 PIH1D3Q9NQM4 214 aaKnown RBP18.28■□□□□ 0.52
IMP4-204ENST00000428740 ATRNL1Q5VV63 1379 aa18.28■□□□□ 0.52
IMP4-204ENST00000428740 APBB1O00213 710 aa18.27■□□□□ 0.52
IMP4-204ENST00000428740 IDH1O75874 414 aaKnown RBP18.27■□□□□ 0.52
IMP4-204ENST00000428740 SP3Q02447 781 aa18.27■□□□□ 0.52
IMP4-204ENST00000428740 TAF1CQ15572 869 aaPredicted RBP18.27■□□□□ 0.52
IMP4-204ENST00000428740 AATFQ9NY61 560 aaKnown RBP eCLIP18.27■□□□□ 0.52
IMP4-204ENST00000428740 PI4KBQ9UBF8 816 aa18.27■□□□□ 0.52
IMP4-204ENST00000428740 HERC5Q9UII4 1024 aaKnown RBP18.27■□□□□ 0.52
IMP4-204ENST00000428740 KCNH4Q9UQ05 1017 aa18.27■□□□□ 0.52
IMP4-204ENST00000428740 CYP7A1P22680 504 aa18.26■□□□□ 0.51
IMP4-204ENST00000428740 FOXP4Q8IVH2 680 aaPredicted RBP18.26■□□□□ 0.51
IMP4-204ENST00000428740 SH3RF3Q8TEJ3 882 aaPredicted RBP18.26■□□□□ 0.51
IMP4-204ENST00000428740 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.26■□□□□ 0.51
IMP4-204ENST00000428740 COL2A1P02458 1487 aaPredicted RBP18.26■□□□□ 0.51
IMP4-204ENST00000428740 FBXO46Q6PJ61 603 aaPredicted RBP18.25■□□□□ 0.51
IMP4-204ENST00000428740 FASTKD5Q7L8L6 764 aaKnown RBP18.25■□□□□ 0.51
IMP4-204ENST00000428740 ANKRD23Q86SG2 305 aa18.25■□□□□ 0.51
IMP4-204ENST00000428740 FAM43AQ8N2R8 423 aa18.25■□□□□ 0.51
IMP4-204ENST00000428740 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
IMP4-204ENST00000428740 LRRCC1Q9C099 1032 aa18.25■□□□□ 0.51
IMP4-204ENST00000428740 ZHX2Q9Y6X8 837 aa18.25■□□□□ 0.51
IMP4-204ENST00000428740 BTBD19C9JJ37 291 aa18.24■□□□□ 0.51
IMP4-204ENST00000428740 PTPRAP18433 802 aa18.24■□□□□ 0.51
IMP4-204ENST00000428740 MAGEB6Q8N7X4 407 aa18.24■□□□□ 0.51
IMP4-204ENST00000428740 TGFBRAP1Q8WUH2 860 aa18.24■□□□□ 0.51
IMP4-204ENST00000428740 TLR2O60603 784 aa18.23■□□□□ 0.51
IMP4-204ENST00000428740 AK9Q5TCS8 1911 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 ATP5JP18859 108 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 RGS19P49795 217 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 KIF22Q14807 665 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 ADGRA1Q86SQ6 560 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 TRIM34Q9BYJ4 488 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 ANTXR1Q9H6X2 564 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 GINM1Q9NU53 330 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 HPS5Q9UPZ3 1129 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 AFG3L2Q9Y4W6 797 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 TRIM17Q9Y577 477 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 LAMB1P07942 1786 aa18.22■□□□□ 0.51
IMP4-204ENST00000428740 OTOFQ9HC10 1997 aa18.21■□□□□ 0.51
IMP4-204ENST00000428740 PDHXO00330 501 aa18.21■□□□□ 0.51
IMP4-204ENST00000428740 HLA-DOAP06340 250 aa18.21■□□□□ 0.51
IMP4-204ENST00000428740 USP5P45974 858 aa18.21■□□□□ 0.51
IMP4-204ENST00000428740 DCTPP1Q9H773 170 aa18.21■□□□□ 0.51
IMP4-204ENST00000428740 EFCC1Q9HA90 598 aa18.21■□□□□ 0.51
IMP4-204ENST00000428740 GNRH1P01148 92 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms