RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-208ENST00000428599 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC87Q9NVE4 849 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-208ENST00000428599 PPP1R21Q6ZMI0 780 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 GPR161Q8N6U8 529 aaKnown RBP10.03□□□□□ -0.8
CTNND1-208ENST00000428599 MIGA1Q8NAN2 632 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 ESYT1Q9BSJ8 1104 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 PKD2L1Q9P0L9 805 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 KDM5AP29375 1690 aaKnown RBP10.03□□□□□ -0.8
CTNND1-208ENST00000428599 CTAGE9A4FU28 777 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
CTNND1-208ENST00000428599 CLUL1Q15846 466 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 LIN9Q5TKA1 542 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 GDPD2Q9HCC8 539 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 STK24Q9Y6E0 443 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 METP08581 1390 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 TTC41PQ6P2S7 1318 aa10.02□□□□□ -0.8
CTNND1-208ENST00000428599 ZSCAN22P10073 491 aaPredicted RBP10.02□□□□□ -0.8
CTNND1-208ENST00000428599 ERCC5P28715 1186 aaPredicted RBP10.02□□□□□ -0.8
CTNND1-208ENST00000428599 MCM7P33993 719 aa10.02□□□□□ -0.8
CTNND1-208ENST00000428599 Q6ZUG5 572 aa10.02□□□□□ -0.8
CTNND1-208ENST00000428599 HACE1Q8IYU2 909 aa10.02□□□□□ -0.8
CTNND1-208ENST00000428599 VPS52Q8N1B4 723 aa10.02□□□□□ -0.8
CTNND1-208ENST00000428599 MLH3Q9UHC1 1453 aa10.02□□□□□ -0.8
CTNND1-208ENST00000428599 PREX2Q70Z35 1606 aa10.02□□□□□ -0.8
CTNND1-208ENST00000428599 ITGA6P23229 1130 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 PDE6BP35913 854 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 UBXN1Q04323 297 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 SETDB1Q15047 1291 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 DCAF17Q5H9S7 520 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-208ENST00000428599 DNAJC10Q8IXB1 793 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 TCEANC2Q96MN5 208 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 AZI2Q9H6S1 392 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 RNF216Q9NWF9 866 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-208ENST00000428599 DENND2AQ9ULE3 1009 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 CCDC169A6NNP5 214 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 VIMP08670 466 aaKnown RBP10.02□□□□□ -0.81
CTNND1-208ENST00000428599 RAPGEF1Q13905 1077 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 KIF22Q14807 665 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 ATRIPQ8WXE1 791 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 RNF113AO15541 343 aaKnown RBP10.02□□□□□ -0.81
CTNND1-208ENST00000428599 HOXB7P09629 217 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 SATB1Q01826 763 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 SUPT20HQ8NEM7 779 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 LEO1Q8WVC0 666 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-208ENST00000428599 CNGA1P29973 690 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 DNM2P50570 870 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 SV2BQ7L1I2 683 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 TSGA10Q9BZW7 698 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 SLC5A4Q9NY91 659 aa10.02□□□□□ -0.81
CTNND1-208ENST00000428599 ZBED4O75132 1171 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 APBA3O96018 575 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 MARCKSP29966 332 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-208ENST00000428599 TNNC1P63316 161 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 SEC62Q99442 399 aaKnown RBP10.01□□□□□ -0.81
CTNND1-208ENST00000428599 DCTPP1Q9H773 170 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 SPC25Q9HBM1 224 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 KCNK9Q9NPC2 374 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 STIM2Q9P246 746 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 SBNO2Q9Y2G9 1366 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 PPP1R2P41236 205 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 CCDC25Q86WR0 208 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 TACC3Q9Y6A5 838 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 CHL1O00533 1208 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 UFL1O94874 794 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 ATP5DP30049 168 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 KRT9P35527 623 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 TEX11Q8IYF3 940 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 CCDC89Q8N998 374 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 GLT8D2Q9H1C3 349 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 PDE8AO60658 829 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 CIB2O75838 187 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 MAP7Q14244 749 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 SRGAP1Q7Z6B7 1085 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 NECAB1Q8N987 351 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 ZBTB40Q9NUA8 1239 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 TUBB4AP04350 444 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 EP400NLQ6ZTU2 488 aa10.01□□□□□ -0.81
CTNND1-208ENST00000428599 HAUS3Q68CZ6 603 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 CCDC121Q6ZUS5 278 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 ZNF496Q96IT1 587 aaPredicted RBP10□□□□□ -0.81
CTNND1-208ENST00000428599 GINS2Q9Y248 185 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 AFG3L2Q9Y4W6 797 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 CALUO43852 315 aaPredicted RBP10□□□□□ -0.81
CTNND1-208ENST00000428599 CCT6AP40227 531 aaKnown RBP10□□□□□ -0.81
CTNND1-208ENST00000428599 TUBB4BP68371 445 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 ITIH3Q06033 890 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 UAP1Q16222 522 aaPredicted RBP10□□□□□ -0.81
CTNND1-208ENST00000428599 VWA3BQ502W6 1294 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 HSP90AA4PQ58FG1 418 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 SMIM23A6NLE4 172 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 SPTLC2O15270 562 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 USP19O94966 1318 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 SEPT6Q14141 434 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 TBC1D32Q96NH3 1257 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms