RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 TGFBRAP1Q8WUH2 860 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 PHKBQ93100 1093 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
PEX1-203ENST00000428214 ALX1Q15699 326 aa13.15□□□□□ -0.3
PEX1-203ENST00000428214 AOC3Q16853 763 aa13.15□□□□□ -0.3
PEX1-203ENST00000428214 RASGRP2Q7LDG7 609 aa13.15□□□□□ -0.3
PEX1-203ENST00000428214 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
PEX1-203ENST00000428214 H0YIN7 160 aa13.15□□□□□ -0.3
PEX1-203ENST00000428214 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
PEX1-203ENST00000428214 PLCD1P51178 756 aa13.15□□□□□ -0.3
PEX1-203ENST00000428214 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.3
PEX1-203ENST00000428214 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.31
PEX1-203ENST00000428214 F13A1P00488 732 aa13.15□□□□□ -0.31
PEX1-203ENST00000428214 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.31
PEX1-203ENST00000428214 TIAM2Q8IVF5 1701 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 COL4A5P29400 1685 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 KCNA3P22001 575 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 CACNB3P54284 484 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
PEX1-203ENST00000428214 MAST2Q6P0Q8 1798 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 BTDP43251 543 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 GSE1Q14687 1217 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
PEX1-203ENST00000428214 FAM217BQ9NTX9 383 aaPredicted RBP13.14□□□□□ -0.31
PEX1-203ENST00000428214 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 FIBPO43427 364 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
PEX1-203ENST00000428214 TRDNQ13061 729 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 TMEM67Q5HYA8 995 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 C15orf52Q6ZUT6 534 aaKnown RBP13.14□□□□□ -0.31
PEX1-203ENST00000428214 C7orf43Q8WVR3 580 aa13.14□□□□□ -0.31
PEX1-203ENST00000428214 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
PEX1-203ENST00000428214 APOA5Q6Q788 366 aa13.13□□□□□ -0.31
PEX1-203ENST00000428214 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
PEX1-203ENST00000428214 STAG1Q8WVM7 1258 aa13.13□□□□□ -0.31
PEX1-203ENST00000428214 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
PEX1-203ENST00000428214 MKRN1Q9UHC7 482 aaKnown RBP13.13□□□□□ -0.31
PEX1-203ENST00000428214 ANGEL1Q9UNK9 670 aaKnown RBP13.13□□□□□ -0.31
PEX1-203ENST00000428214 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
PEX1-203ENST00000428214 IFIT3O14879 490 aaKnown RBP13.13□□□□□ -0.31
PEX1-203ENST00000428214 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
PEX1-203ENST00000428214 DPEP1P16444 411 aa13.13□□□□□ -0.31
PEX1-203ENST00000428214 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
PEX1-203ENST00000428214 NACAP1Q9BZK3 213 aa13.13□□□□□ -0.31
PEX1-203ENST00000428214 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
PEX1-203ENST00000428214 ALDH1B1P30837 517 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 SMARCC2Q8TAQ2 1214 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
PEX1-203ENST00000428214 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 DDX11L8A8MPP1 907 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 GNAT2P19087 354 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 GUCY1A2P33402 732 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 GAS2L3Q86XJ1 694 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 SNED1Q8TER0 1413 aa13.12□□□□□ -0.31
PEX1-203ENST00000428214 RHBDL3P58872 404 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
PEX1-203ENST00000428214 PICALMQ13492 652 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
PEX1-203ENST00000428214 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
PEX1-203ENST00000428214 EVCP57679 992 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 CAVIN1Q6NZI2 390 aaKnown RBP13.11□□□□□ -0.31
PEX1-203ENST00000428214 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
PEX1-203ENST00000428214 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 ZMYM6O95789 1325 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 YDJCA8MPS7 323 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 USP5P45974 858 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 ENAHQ8N8S7 591 aaPredicted RBP13.11□□□□□ -0.31
PEX1-203ENST00000428214 ZNF274Q96GC6 653 aaPredicted RBP13.11□□□□□ -0.31
PEX1-203ENST00000428214 SCAF8Q9UPN6 1271 aaKnown RBP13.11□□□□□ -0.31
PEX1-203ENST00000428214 TNKSO95271 1327 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 LAMB1P07942 1786 aa13.11□□□□□ -0.31
PEX1-203ENST00000428214 SHROOM1Q2M3G4 852 aaPredicted RBP13.1□□□□□ -0.31
PEX1-203ENST00000428214 ZFPM1Q8IX07 1006 aa13.1□□□□□ -0.31
PEX1-203ENST00000428214 TTF2Q9UNY4 1162 aaKnown RBP13.1□□□□□ -0.31
PEX1-203ENST00000428214 ZNF646O15015 1829 aaPredicted RBP13.1□□□□□ -0.31
PEX1-203ENST00000428214 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
PEX1-203ENST00000428214 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
PEX1-203ENST00000428214 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
PEX1-203ENST00000428214 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
PEX1-203ENST00000428214 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
PEX1-203ENST00000428214 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
PEX1-203ENST00000428214 NFIAQ12857 509 aa13.1□□□□□ -0.31
PEX1-203ENST00000428214 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
PEX1-203ENST00000428214 CLEC10AQ8IUN9 316 aa13.1□□□□□ -0.31
PEX1-203ENST00000428214 ECE2O60344 883 aa13.09□□□□□ -0.31
PEX1-203ENST00000428214 NUP133Q8WUM0 1156 aa13.09□□□□□ -0.31
PEX1-203ENST00000428214 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
PEX1-203ENST00000428214 NAV1Q8NEY1 1877 aa13.09□□□□□ -0.31
PEX1-203ENST00000428214 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
PEX1-203ENST00000428214 METAP2P50579 478 aaKnown RBP eCLIP13.09□□□□□ -0.31
PEX1-203ENST00000428214 SEC23AQ15436 765 aa13.09□□□□□ -0.31
PEX1-203ENST00000428214 SHISA4Q96DD7 197 aa13.09□□□□□ -0.31
PEX1-203ENST00000428214 COA1Q9GZY4 146 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms