RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 IGF2-ASQ6U949 168 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 RNF180Q86T96 592 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 CCDC89Q8N998 374 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 MYRIPQ8NFW9 859 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 RSPH1Q8WYR4 309 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 SRPK1Q96SB4 655 aaKnown RBP3.87□□□□□ -1.79
RGPD1-203ENST00000428128 NUDT12Q9BQG2 462 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 HERPUD2Q9BSE4 406 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 C2orf49Q9BVC5 232 aaPredicted RBP3.87□□□□□ -1.79
RGPD1-203ENST00000428128 ZHX3Q9H4I2 956 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 PTPRHQ9HD43 1115 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 ANO2Q9NQ90 1003 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 PUF60Q9UHX1 559 aaKnown RBP3.87□□□□□ -1.79
RGPD1-203ENST00000428128 PCDHGA11Q9Y5H2 935 aa3.87□□□□□ -1.79
RGPD1-203ENST00000428128 PNPLA6Q8IY17 1366 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 ORC4O43929 436 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 FAM133BQ5BKY9 247 aaKnown RBP3.86□□□□□ -1.79
RGPD1-203ENST00000428128 WDR45BQ5MNZ6 344 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 ANKS3Q6ZW76 656 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 ANKRD13BQ86YJ7 626 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 STAG2Q8N3U4 1231 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 THAP3Q8WTV1 239 aaPredicted RBP3.86□□□□□ -1.79
RGPD1-203ENST00000428128 TMEM134Q9H6X4 195 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 ZFATQ9P243 1243 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 DDX60Q8IY21 1712 aaKnown RBP3.86□□□□□ -1.79
RGPD1-203ENST00000428128 UBR2Q8IWV8 1755 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 DHX16O60231 1041 aaKnown RBP3.86□□□□□ -1.79
RGPD1-203ENST00000428128 HIP1RO75146 1068 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 RASGRP1O95267 797 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 SCGB1D2O95969 90 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 F12P00748 615 aaPredicted RBP3.86□□□□□ -1.79
RGPD1-203ENST00000428128 MZF1P28698 734 aaPredicted RBP3.86□□□□□ -1.79
RGPD1-203ENST00000428128 ETFBP38117 255 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 LMOD3Q0VAK6 560 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 MYO1HQ8N1T3 1032 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 RSRP1Q9BUV0 290 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 SARGQ9BW04 601 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 ZSWIM6Q9HCJ5 1215 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 GTF2A1LQ9UNN4 478 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 UBR3Q6ZT12 1888 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 ST18O60284 1047 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 IGHDP01880 384 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 HSP90AB1P08238 724 aaKnown RBP3.86□□□□□ -1.79
RGPD1-203ENST00000428128 FDX1P10109 184 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 MTA1Q13330 715 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 LARP1BQ659C4 914 aaKnown RBP3.86□□□□□ -1.79
RGPD1-203ENST00000428128 LYPD8Q6UX82 237 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 FAM167BQ9BTA0 163 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 SPEF1Q9Y4P9 236 aa3.86□□□□□ -1.79
RGPD1-203ENST00000428128 VPS8Q8N3P4 1428 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 SHTN1A0MZ66 631 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 PHF20L1A8MW92 1017 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 VARSP26640 1264 aaKnown RBP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 GPSM2P81274 684 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 KIAA0319Q5VV43 1072 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 LVRNQ6Q4G3 990 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 SMAP1Q8IYB5 467 aaPredicted RBP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 MAGEB6Q8N7X4 407 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 PRIMPOLQ96LW4 560 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 TBATAQ96M53 351 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 SETDB2Q96T68 719 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 DDX21Q9NR30 783 aaKnown RBP eCLIP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 SIPA1L3O60292 1781 aaPredicted RBP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 ATN1P54259 1190 aaPredicted RBP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 GBX1Q14549 363 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 LONRF2Q1L5Z9 754 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 UVSSAQ2YD98 709 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 KIAA1614Q5VZ46 1190 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 C14orf80Q86SX3 495 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 TTC30BQ8N4P2 665 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 PDCD7Q8N8D1 485 aaKnown RBP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 NINJ1Q92982 152 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 RHOBTB2Q9BYZ6 727 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 IPPQ9Y573 584 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 INSRP06213 1382 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 BAIAP3O94812 1187 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 LMNB1P20700 586 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 HOXC13P31276 330 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 CNGB1Q14028 1251 aaPredicted RBP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 DCTN1Q14203 1278 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 L1TD1Q5T7N2 865 aaKnown RBP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 ALKBH2Q6NS38 261 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 DDX42Q86XP3 938 aaKnown RBP eCLIP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 FAM43AQ8N2R8 423 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 GAS2L2Q8NHY3 880 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 PGBD4Q96DM1 585 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 MS4A3Q96HJ5 214 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 RTFDC1Q9BY42 306 aaPredicted RBP3.85□□□□□ -1.79
RGPD1-203ENST00000428128 AS3MTQ9HBK9 375 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 PCDHGB7Q9Y5F8 929 aa3.85□□□□□ -1.79
RGPD1-203ENST00000428128 A0A1W2PRQ8 180 aa3.84□□□□□ -1.79
RGPD1-203ENST00000428128 ABLIM3O94929 683 aa3.84□□□□□ -1.79
RGPD1-203ENST00000428128 CAP2P40123 477 aa3.84□□□□□ -1.79
RGPD1-203ENST00000428128 ATP2B2Q01814 1243 aa3.84□□□□□ -1.79
RGPD1-203ENST00000428128 LRRC41Q15345 812 aa3.84□□□□□ -1.79
RGPD1-203ENST00000428128 NBPF9Q3BBW0 867 aa3.84□□□□□ -1.79
RGPD1-203ENST00000428128 CXorf57Q6NSI4 855 aaKnown RBP3.84□□□□□ -1.79
RGPD1-203ENST00000428128 DEPDC4Q8N2C3 294 aa3.84□□□□□ -1.79
RGPD1-203ENST00000428128 DNAJC7Q99615 494 aa3.84□□□□□ -1.79
RGPD1-203ENST00000428128 NT5C1AQ9BXI3 368 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms