RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 WDHD1O75717 1129 aaPredicted RBP25.21■■□□□ 1.63
HSPG2-205ENST00000427897 TEX11Q8IYF3 940 aa25.21■■□□□ 1.63
HSPG2-205ENST00000427897 MCOLN1Q9GZU1 580 aa25.21■■□□□ 1.63
HSPG2-205ENST00000427897 SPDYE5A6NIY4 337 aa25.2■■□□□ 1.62
HSPG2-205ENST00000427897 GPR25O00155 361 aa25.2■■□□□ 1.62
HSPG2-205ENST00000427897 IDH1O75874 414 aaKnown RBP25.2■■□□□ 1.62
HSPG2-205ENST00000427897 PLCG2P16885 1265 aa25.2■■□□□ 1.62
HSPG2-205ENST00000427897 SIRT2Q8IXJ6 389 aa25.2■■□□□ 1.62
HSPG2-205ENST00000427897 ZNF384Q8TF68 577 aa25.2■■□□□ 1.62
HSPG2-205ENST00000427897 ZNF296Q8WUU4 475 aaPredicted RBP25.2■■□□□ 1.62
HSPG2-205ENST00000427897 SNCAIPQ9Y6H5 919 aa25.2■■□□□ 1.62
HSPG2-205ENST00000427897 CCL15-CCL14A0A0B4J2E2 113 aa25.19■■□□□ 1.62
HSPG2-205ENST00000427897 CCDC85CA6NKD9 419 aa25.19■■□□□ 1.62
HSPG2-205ENST00000427897 IGSF3O75054 1194 aa25.19■■□□□ 1.62
HSPG2-205ENST00000427897 INPP5BP32019 993 aa25.19■■□□□ 1.62
HSPG2-205ENST00000427897 RHBDL3P58872 404 aa25.19■■□□□ 1.62
HSPG2-205ENST00000427897 CCL15Q16663 113 aa25.19■■□□□ 1.62
HSPG2-205ENST00000427897 AATFQ9NY61 560 aaKnown RBP eCLIP25.19■■□□□ 1.62
HSPG2-205ENST00000427897 IGF2BP3O00425 579 aaKnown RBP eCLIP25.18■■□□□ 1.62
HSPG2-205ENST00000427897 FKTNO75072 461 aa25.18■■□□□ 1.62
HSPG2-205ENST00000427897 CETPP11597 493 aa25.18■■□□□ 1.62
HSPG2-205ENST00000427897 CYP7A1P22680 504 aa25.18■■□□□ 1.62
HSPG2-205ENST00000427897 DDX4Q9NQI0 724 aaKnown RBP25.18■■□□□ 1.62
HSPG2-205ENST00000427897 PIH1D3Q9NQM4 214 aaKnown RBP25.18■■□□□ 1.62
HSPG2-205ENST00000427897 DDTLA6NHG4 134 aaPredicted RBP25.17■■□□□ 1.62
HSPG2-205ENST00000427897 PPATQ06203 517 aa25.17■■□□□ 1.62
HSPG2-205ENST00000427897 MAP3K12Q12852 859 aa25.17■■□□□ 1.62
HSPG2-205ENST00000427897 SNAPC2Q13487 334 aa25.17■■□□□ 1.62
HSPG2-205ENST00000427897 CTU1Q7Z7A3 348 aaKnown RBP25.17■■□□□ 1.62
HSPG2-205ENST00000427897 CFHR5Q9BXR6 569 aa25.17■■□□□ 1.62
HSPG2-205ENST00000427897 PICK1Q9NRD5 415 aa25.17■■□□□ 1.62
HSPG2-205ENST00000427897 ZNF112Q9UJU3 913 aa25.17■■□□□ 1.62
HSPG2-205ENST00000427897 TESPA1A2RU30 521 aaPredicted RBP25.16■■□□□ 1.62
HSPG2-205ENST00000427897 PPIL2Q13356 520 aa25.16■■□□□ 1.62
HSPG2-205ENST00000427897 TTF1Q15361 905 aaPredicted RBP25.16■■□□□ 1.62
HSPG2-205ENST00000427897 SH3RF3Q8TEJ3 882 aaPredicted RBP25.16■■□□□ 1.62
HSPG2-205ENST00000427897 MS4A4AQ96JQ5 239 aa25.16■■□□□ 1.62
HSPG2-205ENST00000427897 DOCK2Q92608 1830 aa25.16■■□□□ 1.62
HSPG2-205ENST00000427897 NPM3O75607 178 aaKnown RBP25.15■■□□□ 1.62
HSPG2-205ENST00000427897 NOM1Q5C9Z4 860 aaKnown RBP25.15■■□□□ 1.62
HSPG2-205ENST00000427897 LRRCC1Q9C099 1032 aa25.15■■□□□ 1.62
HSPG2-205ENST00000427897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.15■■□□□ 1.62
HSPG2-205ENST00000427897 NDUFB9Q9Y6M9 179 aa25.15■■□□□ 1.62
HSPG2-205ENST00000427897 MAST2Q6P0Q8 1798 aa25.14■■□□□ 1.62
HSPG2-205ENST00000427897 IRF6O14896 467 aa25.14■■□□□ 1.62
HSPG2-205ENST00000427897 TAF1CQ15572 869 aaPredicted RBP25.14■■□□□ 1.62
HSPG2-205ENST00000427897 SH3BP5LQ7L8J4 393 aa25.14■■□□□ 1.62
HSPG2-205ENST00000427897 BRI3BPQ8WY22 251 aa25.14■■□□□ 1.62
HSPG2-205ENST00000427897 DNAJC2Q99543 621 aaKnown RBP25.14■■□□□ 1.62
HSPG2-205ENST00000427897 PTPN18Q99952 460 aa25.14■■□□□ 1.62
HSPG2-205ENST00000427897 OSBPL5Q9H0X9 879 aaPredicted RBP25.14■■□□□ 1.62
HSPG2-205ENST00000427897 ZFYVE28Q9HCC9 887 aa25.14■■□□□ 1.62
HSPG2-205ENST00000427897 CRHR2Q13324 411 aa25.13■■□□□ 1.61
HSPG2-205ENST00000427897 MAGEB6Q8N7X4 407 aa25.13■■□□□ 1.61
HSPG2-205ENST00000427897 TGFBRAP1Q8WUH2 860 aa25.13■■□□□ 1.61
HSPG2-205ENST00000427897 TRIM34Q9BYJ4 488 aa25.13■■□□□ 1.61
HSPG2-205ENST00000427897 R3HDMLQ9H3Y0 253 aa25.13■■□□□ 1.61
HSPG2-205ENST00000427897 RRP1P56182 461 aaKnown RBP25.12■■□□□ 1.61
HSPG2-205ENST00000427897 PPP4CP60510 307 aa25.12■■□□□ 1.61
HSPG2-205ENST00000427897 PKN2Q16513 984 aaKnown RBP25.12■■□□□ 1.61
HSPG2-205ENST00000427897 NOL9Q5SY16 702 aaKnown RBP25.12■■□□□ 1.61
HSPG2-205ENST00000427897 SCYL3Q8IZE3 742 aa25.12■■□□□ 1.61
HSPG2-205ENST00000427897 ANTXR1Q9H6X2 564 aa25.12■■□□□ 1.61
HSPG2-205ENST00000427897 RFX7Q2KHR2 1363 aa25.12■■□□□ 1.61
HSPG2-205ENST00000427897 LAMB1P07942 1786 aa25.12■■□□□ 1.61
HSPG2-205ENST00000427897 MYO5AQ9Y4I1 1855 aaKnown RBP25.11■■□□□ 1.61
HSPG2-205ENST00000427897 CERS3Q8IU89 383 aa25.11■■□□□ 1.61
HSPG2-205ENST00000427897 MAPKAPK5Q8IW41 473 aa25.11■■□□□ 1.61
HSPG2-205ENST00000427897 DHX36Q9H2U1 1008 aaKnown RBP25.11■■□□□ 1.61
HSPG2-205ENST00000427897 CTNND1O60716 968 aaKnown RBP25.1■■□□□ 1.61
HSPG2-205ENST00000427897 USP5P45974 858 aa25.1■■□□□ 1.61
HSPG2-205ENST00000427897 TMED8Q6PL24 325 aaPredicted RBP25.1■■□□□ 1.61
HSPG2-205ENST00000427897 ADGRA1Q86SQ6 560 aa25.1■■□□□ 1.61
HSPG2-205ENST00000427897 MIGA1Q8NAN2 632 aa25.1■■□□□ 1.61
HSPG2-205ENST00000427897 ATRNL1Q5VV63 1379 aa25.09■■□□□ 1.61
HSPG2-205ENST00000427897 PHF20L1A8MW92 1017 aa25.09■■□□□ 1.61
HSPG2-205ENST00000427897 GOLIM4O00461 696 aa25.09■■□□□ 1.61
HSPG2-205ENST00000427897 TBC1D12O60347 775 aa25.09■■□□□ 1.61
HSPG2-205ENST00000427897 DYNLL1P63167 89 aaKnown RBP25.09■■□□□ 1.61
HSPG2-205ENST00000427897 CRACR2BQ8N4Y2 399 aaPredicted RBP25.09■■□□□ 1.61
HSPG2-205ENST00000427897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.09■■□□□ 1.61
HSPG2-205ENST00000427897 ERO1AQ96HE7 468 aa25.09■■□□□ 1.61
HSPG2-205ENST00000427897 PI4KBQ9UBF8 816 aa25.09■■□□□ 1.61
HSPG2-205ENST00000427897 ZHX2Q9Y6X8 837 aa25.09■■□□□ 1.61
HSPG2-205ENST00000427897 SP3Q02447 781 aa25.08■■□□□ 1.61
HSPG2-205ENST00000427897 MAP3K10Q02779 954 aa25.08■■□□□ 1.61
HSPG2-205ENST00000427897 FAM43AQ8N2R8 423 aa25.08■■□□□ 1.61
HSPG2-205ENST00000427897 BOLA2Q9H3K6 86 aa25.08■■□□□ 1.61
HSPG2-205ENST00000427897 FAM196BA6NMK8 535 aa25.07■■□□□ 1.6
HSPG2-205ENST00000427897 BTBD19C9JJ37 291 aa25.07■■□□□ 1.6
HSPG2-205ENST00000427897 SMARCA5O60264 1052 aaPredicted RBP25.07■■□□□ 1.6
HSPG2-205ENST00000427897 HLA-DOAP06340 250 aa25.07■■□□□ 1.6
HSPG2-205ENST00000427897 ARHGEF6Q15052 776 aa25.07■■□□□ 1.6
HSPG2-205ENST00000427897 SLC9C2Q5TAH2 1124 aa25.07■■□□□ 1.6
HSPG2-205ENST00000427897 ZCCHC17Q9NP64 241 aaKnown RBP25.07■■□□□ 1.6
HSPG2-205ENST00000427897 HERC5Q9UII4 1024 aaKnown RBP25.07■■□□□ 1.6
HSPG2-205ENST00000427897 CXCL11O14625 94 aa25.06■■□□□ 1.6
HSPG2-205ENST00000427897 SLURP2P0DP57 97 aa25.06■■□□□ 1.6
HSPG2-205ENST00000427897 PTPRAP18433 802 aa25.06■■□□□ 1.6
HSPG2-205ENST00000427897 SAP30BPQ9UHR5 308 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms