RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 GTPBP3Q969Y2 492 aaKnown RBP6.33□□□□□ -1.4
NUDCD1-202ENST00000427660 SLC26A8Q96RN1 970 aa6.33□□□□□ -1.4
NUDCD1-202ENST00000427660 GMIPQ9P107 970 aa6.33□□□□□ -1.4
NUDCD1-202ENST00000427660 CCDC163A0A0D9SF12 145 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 UPK3BL1B0FP48 263 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 B2RBV5 119 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 UPK3BL2E5RIL1 263 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 GFRA2O00451 464 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 HCLS1P14317 486 aaPredicted RBP6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 HNRNPUQ00839 825 aaKnown RBP eCLIP6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 MAP1SQ66K74 1059 aaPredicted RBP6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 MRM1Q6IN84 353 aaKnown RBP6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 TTC9Q92623 222 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 PHAXQ9H814 394 aaKnown RBP6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 KRT82Q9NSB4 513 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 CHPF2Q9P2E5 772 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 SLC6A14Q9UN76 642 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 ARID4BQ4LE39 1312 aaPredicted RBP6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 IQCA1LA6NCM1 817 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 CPB1P15086 417 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 ITGA6P23229 1130 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 CTBSQ01459 385 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 PERM1Q5SV97 790 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 FOXR1Q6PIV2 292 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 ELMSAN1Q6PJG2 1045 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 ANTXR1Q9H6X2 564 aa6.32□□□□□ -1.4
NUDCD1-202ENST00000427660 TBC1D8BQ0IIM8 1120 aa6.31□□□□□ -1.4
NUDCD1-202ENST00000427660 LRRC47Q8N1G4 583 aaKnown RBP6.31□□□□□ -1.4
NUDCD1-202ENST00000427660 SPATA9Q9BWV2 254 aa6.31□□□□□ -1.4
NUDCD1-202ENST00000427660 SMG9Q9H0W8 520 aaKnown RBP6.31□□□□□ -1.4
NUDCD1-202ENST00000427660 CD2APQ9Y5K6 639 aa6.31□□□□□ -1.4
NUDCD1-202ENST00000427660 H3BRJ5 948 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 CDC27P30260 824 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 TM4SF20Q53R12 229 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 VHLLQ6RSH7 139 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 NINJ1Q92982 152 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 PCDHA4Q9UN74 947 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 TRIM33Q9UPN9 1127 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 SUGT1Q9Y2Z0 365 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 ADARB2-AS1A8MUL3 147 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 SOX1O00570 391 aaPredicted RBP6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 TNFRSF10CO14798 259 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 CYP11A1P05108 521 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 SELPP16109 830 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 WIPI1Q5MNZ9 446 aaPredicted RBP6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 CDCP2Q5VXM1 449 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 MPRIPQ6WCQ1 1025 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 HDXQ7Z353 690 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 ZBTB38Q8NAP3 1195 aaPredicted RBP6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 GPBAR1Q8TDU6 330 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 MFSD3Q96ES6 412 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 LACRTQ9GZZ8 138 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 ATP13A2Q9NQ11 1180 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 FAN1Q9Y2M0 1017 aa6.3□□□□□ -1.4
NUDCD1-202ENST00000427660 RFPL3O75679 317 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 NME1P15531 152 aaKnown RBP6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 PDE4BQ07343 736 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 PKDCCQ504Y2 493 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 TMEM201Q5SNT2 666 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 OVOS1Q6IE37 1185 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 UNC5AQ6ZN44 842 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 NLRC3Q7RTR2 1065 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 FERMT3Q86UX7 667 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 WNT8BQ93098 351 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 ATG4CQ96DT6 458 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 ACSBG1Q96GR2 724 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 SGSM3Q96HU1 749 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 CEP89Q96ST8 783 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 CNNM2Q9H8M5 875 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 HOMER2Q9NSB8 354 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 REV1Q9UBZ9 1251 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 NAGPAQ9UK23 515 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 ADCY3O60266 1144 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 ACRP10323 421 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 EPHA1P21709 976 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 SLC10A6Q3KNW5 377 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 NIM1KQ8IY84 436 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 CHAC2Q8WUX2 184 aa6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 IRX2Q9BZI1 471 aaPredicted RBP6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 SH2B1Q9NRF2 756 aaPredicted RBP6.29□□□□□ -1.4
NUDCD1-202ENST00000427660 SLC22A31A6NKX4 558 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 SOBPA7XYQ1 873 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 KCNQ2O43526 872 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 SUSD5O60279 629 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 FAM153BP0C7A2 387 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 ADH7P40394 386 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 STAT3P40763 770 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 CDK8P49336 464 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 PIP4K2BP78356 416 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 PLPPR2Q96GM1 343 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 MDFIQ99750 246 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 ADAM30Q9UKF2 790 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 ATP8A1Q9Y2Q0 1164 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 LTBP3Q9NS15 1303 aa6.28□□□□□ -1.4
NUDCD1-202ENST00000427660 BMP4P12644 408 aa6.27□□□□□ -1.41
NUDCD1-202ENST00000427660 ARL4DP49703 201 aa6.27□□□□□ -1.41
NUDCD1-202ENST00000427660 EXOSC10Q01780 885 aaKnown RBP6.27□□□□□ -1.41
NUDCD1-202ENST00000427660 GSTM4Q03013 218 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms