RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 SMIM22K7EJ46 135 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 RAD17O75943 681 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 CTDSPL2Q05D32 466 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 CUL4AQ13619 759 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 AKNAD1Q5T1N1 836 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 ROBO3Q96MS0 1386 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 WDR19Q8NEZ3 1342 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 USP17L12C9JPN9 530 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 USP17L21D6R901 530 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 TGFBRAP1Q8WUH2 860 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 LIMCH1Q9UPQ0 1083 aa20.29■□□□□ 0.84
CHEK1-202ENST00000427383 FLT1P17948 1338 aa20.28■□□□□ 0.84
CHEK1-202ENST00000427383 CYP2D7A0A087X1C5 515 aa20.28■□□□□ 0.84
CHEK1-202ENST00000427383 FGRP09769 529 aa20.28■□□□□ 0.84
CHEK1-202ENST00000427383 ANTXR2P58335 489 aa20.28■□□□□ 0.84
CHEK1-202ENST00000427383 CXCL9Q07325 125 aa20.28■□□□□ 0.84
CHEK1-202ENST00000427383 ANKRD1Q15327 319 aa20.28■□□□□ 0.84
CHEK1-202ENST00000427383 RALYLQ86SE5 291 aaKnown RBP20.28■□□□□ 0.84
CHEK1-202ENST00000427383 TEX11Q8IYF3 940 aa20.28■□□□□ 0.84
CHEK1-202ENST00000427383 WDHD1O75717 1129 aaPredicted RBP20.27■□□□□ 0.84
CHEK1-202ENST00000427383 DDIT3P35638 169 aa20.27■□□□□ 0.84
CHEK1-202ENST00000427383 USP5P45974 858 aa20.27■□□□□ 0.84
CHEK1-202ENST00000427383 EVX2Q03828 476 aa20.27■□□□□ 0.84
CHEK1-202ENST00000427383 NOL8Q76FK4 1167 aaKnown RBP20.27■□□□□ 0.84
CHEK1-202ENST00000427383 JDP2Q8WYK2 163 aa20.27■□□□□ 0.84
CHEK1-202ENST00000427383 CNNM2Q9H8M5 875 aa20.27■□□□□ 0.84
CHEK1-202ENST00000427383 MINDY4BA8MYZ0 360 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 MCM5P33992 734 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 TRDNQ13061 729 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 Q6ZUG5 572 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 RNF41Q9H4P4 317 aaPredicted RBP20.26■□□□□ 0.83
CHEK1-202ENST00000427383 INCENPQ9NQS7 918 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 MCM9Q9NXL9 1143 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 LARGE1O95461 756 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 USP17L8P0C7I0 530 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 PCP11498 1178 aaKnown RBP20.26■□□□□ 0.83
CHEK1-202ENST00000427383 C12orf60Q5U649 245 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 CDC42EP5Q6NZY7 148 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 MFSD6Q6ZSS7 791 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 AGBL3Q8NEM8 1001 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 LRRC2Q9BYS8 371 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 TPCN1Q9ULQ1 816 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHEK1-202ENST00000427383 PCDHAC2Q9Y5I4 1007 aa20.26■□□□□ 0.83
CHEK1-202ENST00000427383 B4E1Z4 1266 aa20.25■□□□□ 0.83
CHEK1-202ENST00000427383 PRC1O43663 620 aa20.25■□□□□ 0.83
CHEK1-202ENST00000427383 CYP2D6P10635 497 aa20.25■□□□□ 0.83
CHEK1-202ENST00000427383 CYB5R4Q7L1T6 521 aa20.25■□□□□ 0.83
CHEK1-202ENST00000427383 SPRYD3Q8NCJ5 442 aa20.25■□□□□ 0.83
CHEK1-202ENST00000427383 LARP6Q9BRS8 491 aaKnown RBP20.25■□□□□ 0.83
CHEK1-202ENST00000427383 FZD9O00144 591 aa20.24■□□□□ 0.83
CHEK1-202ENST00000427383 ME3Q16798 604 aa20.24■□□□□ 0.83
CHEK1-202ENST00000427383 CIAPIN1Q6FI81 312 aa20.24■□□□□ 0.83
CHEK1-202ENST00000427383 CHST3Q7LGC8 479 aa20.24■□□□□ 0.83
CHEK1-202ENST00000427383 KRT23Q9C075 422 aa20.24■□□□□ 0.83
CHEK1-202ENST00000427383 DDX4Q9NQI0 724 aaKnown RBP20.24■□□□□ 0.83
CHEK1-202ENST00000427383 SH2B1Q9NRF2 756 aaPredicted RBP20.24■□□□□ 0.83
CHEK1-202ENST00000427383 ZBTB12Q9Y330 459 aaPredicted RBP20.24■□□□□ 0.83
CHEK1-202ENST00000427383 SIPA1L1O43166 1804 aa20.23■□□□□ 0.83
CHEK1-202ENST00000427383 EVCP57679 992 aa20.23■□□□□ 0.83
CHEK1-202ENST00000427383 ST3GAL1Q11201 340 aa20.23■□□□□ 0.83
CHEK1-202ENST00000427383 BRF1Q92994 677 aa20.23■□□□□ 0.83
CHEK1-202ENST00000427383 INTS4Q96HW7 963 aaKnown RBP20.23■□□□□ 0.83
CHEK1-202ENST00000427383 ZSCAN31Q96LW9 406 aaPredicted RBP20.23■□□□□ 0.83
CHEK1-202ENST00000427383 SLKQ9H2G2 1235 aaPredicted RBP20.23■□□□□ 0.83
CHEK1-202ENST00000427383 USP40Q9NVE5 1235 aa20.23■□□□□ 0.83
CHEK1-202ENST00000427383 ORC4O43929 436 aa20.22■□□□□ 0.83
CHEK1-202ENST00000427383 KDM4AO75164 1064 aa20.22■□□□□ 0.83
CHEK1-202ENST00000427383 HSP90AA1P07900 732 aaKnown RBP20.22■□□□□ 0.83
CHEK1-202ENST00000427383 CFAP100Q494V2 611 aa20.22■□□□□ 0.83
CHEK1-202ENST00000427383 ZSWIM5Q9P217 1185 aa20.22■□□□□ 0.83
CHEK1-202ENST00000427383 YBX3P16989 372 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHEK1-202ENST00000427383 PLCD1P51178 756 aa20.21■□□□□ 0.83
CHEK1-202ENST00000427383 TNIP1Q15025 636 aa20.21■□□□□ 0.83
CHEK1-202ENST00000427383 IDI2Q9BXS1 227 aa20.21■□□□□ 0.83
CHEK1-202ENST00000427383 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
CHEK1-202ENST00000427383 SPDYE2BA6NHP3 402 aa20.2■□□□□ 0.82
CHEK1-202ENST00000427383 SH2B2O14492 632 aaPredicted RBP20.2■□□□□ 0.82
CHEK1-202ENST00000427383 NPM3O75607 178 aaKnown RBP20.2■□□□□ 0.82
CHEK1-202ENST00000427383 SPDYE6P0CI01 402 aa20.2■□□□□ 0.82
CHEK1-202ENST00000427383 LMNB1P20700 586 aa20.2■□□□□ 0.82
CHEK1-202ENST00000427383 NFIAQ12857 509 aa20.2■□□□□ 0.82
CHEK1-202ENST00000427383 MTMR14Q8NCE2 650 aa20.2■□□□□ 0.82
CHEK1-202ENST00000427383 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
CHEK1-202ENST00000427383 MTA3Q9BTC8 594 aa20.2■□□□□ 0.82
CHEK1-202ENST00000427383 SAP30BPQ9UHR5 308 aaKnown RBP20.2■□□□□ 0.82
CHEK1-202ENST00000427383 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
CHEK1-202ENST00000427383 RPS12P25398 132 aaKnown RBP20.19■□□□□ 0.82
CHEK1-202ENST00000427383 RBM5P52756 815 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHEK1-202ENST00000427383 ARHGAP27Q6ZUM4 889 aa20.19■□□□□ 0.82
CHEK1-202ENST00000427383 AMOTL1Q8IY63 956 aa20.19■□□□□ 0.82
CHEK1-202ENST00000427383 STK11IPQ8N1F8 1099 aa20.19■□□□□ 0.82
CHEK1-202ENST00000427383 OGFOD1Q8N543 542 aa20.19■□□□□ 0.82
CHEK1-202ENST00000427383 IGDCC4Q8TDY8 1250 aa20.19■□□□□ 0.82
CHEK1-202ENST00000427383 ESR2Q92731 530 aa20.19■□□□□ 0.82
CHEK1-202ENST00000427383 PRMT6Q96LA8 375 aaPredicted RBP20.19■□□□□ 0.82
CHEK1-202ENST00000427383 OSBPL5Q9H0X9 879 aaPredicted RBP20.19■□□□□ 0.82
CHEK1-202ENST00000427383 FOXD4L1Q9NU39 408 aa20.19■□□□□ 0.82
CHEK1-202ENST00000427383 HDAC9Q9UKV0 1011 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms