RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ATXN3LQ9H3M9 355 aa9.33□□□□□ -0.92
C9orf3-205ENST00000427193 TMEM39AQ9NV64 488 aa9.33□□□□□ -0.92
C9orf3-205ENST00000427193 DYNC1LI2O43237 492 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-205ENST00000427193 FCGRTP55899 365 aa9.32□□□□□ -0.92
C9orf3-205ENST00000427193 ID3Q02535 119 aa9.32□□□□□ -0.92
C9orf3-205ENST00000427193 KIF4BQ2VIQ3 1234 aa9.32□□□□□ -0.92
C9orf3-205ENST00000427193 NFXL1Q6ZNB6 911 aa9.32□□□□□ -0.92
C9orf3-205ENST00000427193 WDR89Q96FK6 387 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-205ENST00000427193 LRRC4CQ9HCJ2 640 aa9.32□□□□□ -0.92
C9orf3-205ENST00000427193 BIN2Q9UBW5 565 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-205ENST00000427193 ZC3H7BQ9UGR2 993 aaKnown RBP9.32□□□□□ -0.92
C9orf3-205ENST00000427193 GPN3Q9UHW5 284 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-205ENST00000427193 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
C9orf3-205ENST00000427193 TDRD9Q8NDG6 1382 aaKnown RBP9.32□□□□□ -0.92
C9orf3-205ENST00000427193 ZNF862O60290 1169 aa9.31□□□□□ -0.92
C9orf3-205ENST00000427193 TP53INP2Q8IXH6 220 aa9.31□□□□□ -0.92
C9orf3-205ENST00000427193 FANCD2OSQ96PS1 177 aa9.31□□□□□ -0.92
C9orf3-205ENST00000427193 BCO2Q9BYV7 579 aa9.31□□□□□ -0.92
C9orf3-205ENST00000427193 ZC3H12CQ9C0D7 883 aaKnown RBP9.31□□□□□ -0.92
C9orf3-205ENST00000427193 PIDD1Q9HB75 910 aa9.31□□□□□ -0.92
C9orf3-205ENST00000427193 SNAPC4Q5SXM2 1469 aa9.31□□□□□ -0.92
C9orf3-205ENST00000427193 DNMBPQ6XZF7 1577 aa9.31□□□□□ -0.92
C9orf3-205ENST00000427193 POLA1P09884 1462 aaPredicted RBP9.3□□□□□ -0.92
C9orf3-205ENST00000427193 BRD1O95696 1058 aa9.3□□□□□ -0.92
C9orf3-205ENST00000427193 CYP27C1Q4G0S4 372 aa9.3□□□□□ -0.92
C9orf3-205ENST00000427193 AGBL5Q8NDL9 886 aa9.3□□□□□ -0.92
C9orf3-205ENST00000427193 PCDHGC5Q9Y5F6 944 aa9.3□□□□□ -0.92
C9orf3-205ENST00000427193 WDR97A6NE52 1622 aa9.3□□□□□ -0.92
C9orf3-205ENST00000427193 DSC3Q14574 896 aa9.29□□□□□ -0.92
C9orf3-205ENST00000427193 PI16Q6UXB8 463 aa9.29□□□□□ -0.92
C9orf3-205ENST00000427193 CBLL1Q75N03 491 aa9.29□□□□□ -0.92
C9orf3-205ENST00000427193 FLCNQ8NFG4 579 aa9.29□□□□□ -0.92
C9orf3-205ENST00000427193 LGR6Q9HBX8 967 aa9.29□□□□□ -0.92
C9orf3-205ENST00000427193 PDZD3Q86UT5 571 aa9.28□□□□□ -0.92
C9orf3-205ENST00000427193 DISC1Q9NRI5 854 aa9.28□□□□□ -0.92
C9orf3-205ENST00000427193 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
C9orf3-205ENST00000427193 PNMA6FA0A0J9YX94 578 aa9.27□□□□□ -0.93
C9orf3-205ENST00000427193 TREHO43280 583 aa9.27□□□□□ -0.93
C9orf3-205ENST00000427193 PLCB3Q01970 1234 aa9.27□□□□□ -0.93
C9orf3-205ENST00000427193 ENOX2Q16206 610 aaKnown RBP9.27□□□□□ -0.93
C9orf3-205ENST00000427193 SMYD4Q8IYR2 804 aaPredicted RBP9.27□□□□□ -0.93
C9orf3-205ENST00000427193 KCNB2Q92953 911 aa9.27□□□□□ -0.93
C9orf3-205ENST00000427193 PAK6Q9NQU5 681 aaPredicted RBP9.27□□□□□ -0.93
C9orf3-205ENST00000427193 RAD54L2Q9Y4B4 1467 aa9.27□□□□□ -0.93
C9orf3-205ENST00000427193 MAPK1P28482 360 aa9.26□□□□□ -0.93
C9orf3-205ENST00000427193 SULF2Q8IWU5 870 aa9.26□□□□□ -0.93
C9orf3-205ENST00000427193 STK11IPQ8N1F8 1099 aa9.26□□□□□ -0.93
C9orf3-205ENST00000427193 SYNJ2O15056 1496 aa9.26□□□□□ -0.93
C9orf3-205ENST00000427193 CDK5R2Q13319 367 aa9.25□□□□□ -0.93
C9orf3-205ENST00000427193 TTLL4Q14679 1199 aa9.25□□□□□ -0.93
C9orf3-205ENST00000427193 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.25□□□□□ -0.93
C9orf3-205ENST00000427193 NXPE4Q6UWF7 544 aa9.25□□□□□ -0.93
C9orf3-205ENST00000427193 EMILIN2Q9BXX0 1053 aa9.25□□□□□ -0.93
C9orf3-205ENST00000427193 SLC5A6Q9Y289 635 aa9.25□□□□□ -0.93
C9orf3-205ENST00000427193 AKAP2Q9Y2D5 859 aa9.25□□□□□ -0.93
C9orf3-205ENST00000427193 KIF13AQ9H1H9 1805 aa9.24□□□□□ -0.93
C9orf3-205ENST00000427193 SOGA1O94964 1423 aa9.24□□□□□ -0.93
C9orf3-205ENST00000427193 FAM87AP0C7U9 286 aa9.24□□□□□ -0.93
C9orf3-205ENST00000427193 NME2P22392 152 aa9.24□□□□□ -0.93
C9orf3-205ENST00000427193 ARNTP27540 789 aa9.24□□□□□ -0.93
C9orf3-205ENST00000427193 BCL7CQ8WUZ0 217 aaPredicted RBP9.24□□□□□ -0.93
C9orf3-205ENST00000427193 MISP3Q96FF7 219 aa9.24□□□□□ -0.93
C9orf3-205ENST00000427193 PCOLCE2Q9UKZ9 415 aa9.24□□□□□ -0.93
C9orf3-205ENST00000427193 RNGTTO60942 597 aaKnown RBP9.23□□□□□ -0.93
C9orf3-205ENST00000427193 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
C9orf3-205ENST00000427193 YBX3P16989 372 aaKnown RBP eCLIP9.23□□□□□ -0.93
C9orf3-205ENST00000427193 COL19A1Q14993 1142 aa9.23□□□□□ -0.93
C9orf3-205ENST00000427193 STK35Q8TDR2 534 aa9.23□□□□□ -0.93
C9orf3-205ENST00000427193 FBF1Q8TES7 1133 aa9.23□□□□□ -0.93
C9orf3-205ENST00000427193 SRCIN1Q9C0H9 1055 aa9.23□□□□□ -0.93
C9orf3-205ENST00000427193 GRIN2BQ13224 1484 aa9.22□□□□□ -0.93
C9orf3-205ENST00000427193 ERCC6L2Q5T890 1561 aa9.22□□□□□ -0.93
C9orf3-205ENST00000427193 ERVK-24P63145 666 aa9.22□□□□□ -0.93
C9orf3-205ENST00000427193 ZC3H12AQ5D1E8 599 aaKnown RBP9.22□□□□□ -0.93
C9orf3-205ENST00000427193 C3orf58Q8NDZ4 430 aa9.22□□□□□ -0.93
C9orf3-205ENST00000427193 FBXO41Q8TF61 875 aa9.22□□□□□ -0.93
C9orf3-205ENST00000427193 JUNBP17275 347 aaPredicted RBP9.21□□□□□ -0.94
C9orf3-205ENST00000427193 ITGB5P18084 799 aa9.21□□□□□ -0.94
C9orf3-205ENST00000427193 GSTT1P30711 240 aa9.21□□□□□ -0.94
C9orf3-205ENST00000427193 ZNF252P-AS1Q0IIN9 211 aa9.21□□□□□ -0.94
C9orf3-205ENST00000427193 MAP1SQ66K74 1059 aaPredicted RBP9.21□□□□□ -0.94
C9orf3-205ENST00000427193 NETO1Q8TDF5 533 aa9.21□□□□□ -0.94
C9orf3-205ENST00000427193 ASIC4Q96FT7 647 aa9.21□□□□□ -0.94
C9orf3-205ENST00000427193 NECAB3Q96P71 396 aaPredicted RBP9.21□□□□□ -0.94
C9orf3-205ENST00000427193 MKNK2Q9HBH9 465 aa9.21□□□□□ -0.94
C9orf3-205ENST00000427193 BTBD11A6QL63 1104 aa9.2□□□□□ -0.94
C9orf3-205ENST00000427193 NEFMP07197 916 aa9.2□□□□□ -0.94
C9orf3-205ENST00000427193 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
C9orf3-205ENST00000427193 RNF214Q8ND24 703 aa9.2□□□□□ -0.94
C9orf3-205ENST00000427193 CACNA2D2Q9NY47 1150 aa9.2□□□□□ -0.94
C9orf3-205ENST00000427193 PPM1HQ9ULR3 514 aa9.2□□□□□ -0.94
C9orf3-205ENST00000427193 SAMM50Q9Y512 469 aa9.2□□□□□ -0.94
C9orf3-205ENST00000427193 ABCC10Q5T3U5 1492 aa9.2□□□□□ -0.94
C9orf3-205ENST00000427193 FMR1Q06787 632 aaKnown RBP eCLIP9.19□□□□□ -0.94
C9orf3-205ENST00000427193 WFDC3Q8IUB2 231 aa9.19□□□□□ -0.94
C9orf3-205ENST00000427193 GPBAR1Q8TDU6 330 aa9.19□□□□□ -0.94
C9orf3-205ENST00000427193 ISL2Q96A47 359 aa9.19□□□□□ -0.94
C9orf3-205ENST00000427193 DUSP23Q9BVJ7 150 aa9.19□□□□□ -0.94
C9orf3-205ENST00000427193 CEP44Q9C0F1 390 aa9.19□□□□□ -0.94
C9orf3-205ENST00000427193 CBX8Q9HC52 389 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms