RNA–Protein interactions for RNA: ENST00000426687.2

SHANK2-208, Transcript of SH3 and multiple ankyrin repeat domains 2, human

TSL 5

Gene SHANK2, Length 460 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHANK2-208	ENST00000426687	CWC25	Q9NXE8	425 aa	Predicted RBP	11.26	□□□□□ -0.61
SHANK2-208	ENST00000426687	DBF4	Q9UBU7	674 aa	Predicted RBP	11.26	□□□□□ -0.61
SHANK2-208	ENST00000426687	TRIM35	Q9UPQ4	493 aa		11.26	□□□□□ -0.61
SHANK2-208	ENST00000426687	JAG2	Q9Y219	1238 aa		11.26	□□□□□ -0.61
SHANK2-208	ENST00000426687	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.25	□□□□□ -0.61
SHANK2-208	ENST00000426687	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.25	□□□□□ -0.61
SHANK2-208	ENST00000426687	PRR33	A8MZF0	331 aa		11.25	□□□□□ -0.61
SHANK2-208	ENST00000426687	XRCC5	P13010	732 aa	Known RBP	11.25	□□□□□ -0.61
SHANK2-208	ENST00000426687	ADGRE1	Q14246	886 aa		11.25	□□□□□ -0.61
SHANK2-208	ENST00000426687	MFSD14B	Q5SR56	506 aa		11.25	□□□□□ -0.61
SHANK2-208	ENST00000426687	KCNH6	Q9H252	994 aa		11.25	□□□□□ -0.61
SHANK2-208	ENST00000426687	HYPK	Q9NX55	129 aa		11.25	□□□□□ -0.61
SHANK2-208	ENST00000426687	PLXNB2	O15031	1838 aa		11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	HOXB7	P09629	217 aa		11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	ATN1	P54259	1190 aa	Predicted RBP	11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	CACNB3	P54284	484 aa		11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	CALD1	Q05682	793 aa	Known RBP	11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	CHRND	Q07001	517 aa		11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	CACNB2	Q08289	660 aa	Predicted RBP	11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	CCDC85B	Q15834	202 aa	Predicted RBP	11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	HDGFL1	Q5TGJ6	251 aa		11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	MIGA2	Q7L4E1	593 aa		11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	TRMT44	Q8IYL2	757 aa	Known RBP	11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	JARID2	Q92833	1246 aa	Predicted RBP	11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	MYD88	Q99836	296 aa		11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	PRDM12	Q9H4Q4	367 aa		11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	TCF20	Q9UGU0	1960 aa	Known RBP	11.24	□□□□□ -0.61
SHANK2-208	ENST00000426687	FRMPD3	Q5JV73	1810 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	PI4K2B	G5E9Z4	385 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	CCND3	P30281	292 aa	Predicted RBP	11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	KCNQ1	P51787	676 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	HDLBP	Q00341	1268 aa	Known RBP	11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	GOLGA2	Q08379	1002 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	GADL1	Q6ZQY3	521 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.23	□□□□□ -0.61	6e-7	■■■□□ 16.4
SHANK2-208	ENST00000426687	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	PDLIM7	Q9NR12	457 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	TMOD2	Q9NZR1	351 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	PNMA3	Q9UL41	463 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	AGTPBP1	Q9UPW5	1226 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	ATP11B	Q9Y2G3	1177 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	MYH3	P11055	1940 aa		11.23	□□□□□ -0.61
SHANK2-208	ENST00000426687	SNAP23	O00161	211 aa		11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	DNM1L	O00429	736 aa		11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	ZKSCAN1	P17029	563 aa	Predicted RBP	11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	GCLC	P48506	637 aa	Predicted RBP	11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	TFF2	Q03403	129 aa		11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	SNX17	Q15036	470 aa		11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	SOCS4	Q8WXH5	440 aa		11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	MPHOSPH8	Q99549	860 aa		11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	SALL2	Q9Y467	1007 aa	Predicted RBP	11.22	□□□□□ -0.61
SHANK2-208	ENST00000426687	TRIM43B	A6NCK2	446 aa		11.21	□□□□□ -0.61
SHANK2-208	ENST00000426687	ERC2	O15083	957 aa		11.21	□□□□□ -0.61
SHANK2-208	ENST00000426687	ST18	O60284	1047 aa		11.21	□□□□□ -0.61
SHANK2-208	ENST00000426687	CYP2B6	P20813	491 aa		11.21	□□□□□ -0.61
SHANK2-208	ENST00000426687	EPHB4	P54760	987 aa		11.21	□□□□□ -0.61
SHANK2-208	ENST00000426687	KRT24	Q2M2I5	525 aa		11.21	□□□□□ -0.61
SHANK2-208	ENST00000426687	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.21	□□□□□ -0.61
SHANK2-208	ENST00000426687	AFG3L2	Q9Y4W6	797 aa		11.21	□□□□□ -0.61
SHANK2-208	ENST00000426687	CHD9	Q3L8U1	2897 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	PTPRF	P10586	1907 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	AK9	Q5TCS8	1911 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	CCER2	I3L3R5	266 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	CHL1	O00533	1208 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	PTPRA	P18433	802 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	IGFBP4	P22692	258 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	ITGA6	P23229	1130 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	GNAI1	P63096	354 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	SCYL3	Q8IZE3	742 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	LPAR1	Q92633	364 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	FBXL18	Q96ME1	805 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	ZDHHC15	Q96MV8	337 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	NUDT12	Q9BQG2	462 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	IFT57	Q9NWB7	429 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	ZHX2	Q9Y6X8	837 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687		A0A1B0GUL6	1792 aa		11.2	□□□□□ -0.62
SHANK2-208	ENST00000426687	RLF	Q13129	1914 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	MSC	O60682	206 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	CCDC27	Q2M243	656 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	TRIM60	Q495X7	471 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	C1orf53	Q5VUE5	145 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	SLC39A5	Q6ZMH5	540 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	SH3RF1	Q7Z6J0	888 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	TDRD7	Q8NHU6	1098 aa	Known RBP	11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	FAM151A	Q8WW52	585 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	TEKT1	Q969V4	418 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	PBX4	Q9BYU1	374 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	DAGLA	Q9Y4D2	1042 aa		11.19	□□□□□ -0.62
SHANK2-208	ENST00000426687	USP34	Q70CQ2	3546 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	LRRC37A2	A6NM11	1700 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	ZDBF2	Q9HCK1	2354 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	TLL1	O43897	1013 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	TAF5L	O75529	589 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	TREML2	Q5T2D2	321 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	WWC1	Q8IX03	1113 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	HERVK_113	Q902F9	699 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	USP6NL	Q92738	828 aa		11.18	□□□□□ -0.62
SHANK2-208	ENST00000426687	METTL22	Q9BUU2	404 aa	Predicted RBP	11.18	□□□□□ -0.62

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