RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 COL4A5P29400 1685 aa16.77■□□□□ 0.28
LINC00839-201ENST00000424751 ZNF213O14771 459 aa16.77■□□□□ 0.27
LINC00839-201ENST00000424751 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.27
LINC00839-201ENST00000424751 USP48Q86UV5 1035 aa16.77■□□□□ 0.27
LINC00839-201ENST00000424751 MB21D2Q8IYB1 491 aaPredicted RBP16.77■□□□□ 0.27
LINC00839-201ENST00000424751 TMEM87AQ8NBN3 555 aa16.77■□□□□ 0.27
LINC00839-201ENST00000424751 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.27
LINC00839-201ENST00000424751 NCOA5Q9HCD5 579 aaKnown RBP16.77■□□□□ 0.27
LINC00839-201ENST00000424751 KIAA1551Q9HCM1 1747 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 SNED1Q8TER0 1413 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 MINDY4BA8MYZ0 360 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 SEMA3EO15041 775 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 AOC3Q16853 763 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 MFSD14BQ5SR56 506 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 NAPBQ9H115 298 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 MAST2Q6P0Q8 1798 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 LDHBP07195 334 aaKnown RBP16.76■□□□□ 0.27
LINC00839-201ENST00000424751 SLURP2P0DP57 97 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 PSMA5P28066 241 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 TDO2P48775 406 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 STYK1Q6J9G0 422 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 DZIP1Q86YF9 867 aaKnown RBP16.76■□□□□ 0.27
LINC00839-201ENST00000424751 CCDC94Q9BW85 323 aaPredicted RBP16.76■□□□□ 0.27
LINC00839-201ENST00000424751 PRDM4Q9UKN5 801 aa16.76■□□□□ 0.27
LINC00839-201ENST00000424751 JAK2O60674 1132 aa16.75■□□□□ 0.27
LINC00839-201ENST00000424751 PRDM1O75626 825 aa16.75■□□□□ 0.27
LINC00839-201ENST00000424751 CCT2P78371 535 aaKnown RBP16.75■□□□□ 0.27
LINC00839-201ENST00000424751 DHX32Q7L7V1 743 aaKnown RBP16.75■□□□□ 0.27
LINC00839-201ENST00000424751 ZNF646O15015 1829 aaPredicted RBP16.75■□□□□ 0.27
LINC00839-201ENST00000424751 DLEC1Q9Y238 1755 aa16.75■□□□□ 0.27
LINC00839-201ENST00000424751 GADD45BO75293 160 aaPredicted RBP16.75■□□□□ 0.27
LINC00839-201ENST00000424751 RXRAP19793 462 aa16.75■□□□□ 0.27
LINC00839-201ENST00000424751 SCNN1DP51172 638 aa16.75■□□□□ 0.27
LINC00839-201ENST00000424751 NOLC1Q14978 699 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00839-201ENST00000424751 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
LINC00839-201ENST00000424751 ZC3H12CQ9C0D7 883 aaKnown RBP16.75■□□□□ 0.27
LINC00839-201ENST00000424751 USP17L8P0C7I0 530 aa16.74■□□□□ 0.27
LINC00839-201ENST00000424751 TICAM2Q86XR7 235 aa16.74■□□□□ 0.27
LINC00839-201ENST00000424751 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
LINC00839-201ENST00000424751 PRC1O43663 620 aa16.73■□□□□ 0.27
LINC00839-201ENST00000424751 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
LINC00839-201ENST00000424751 GTF2F1P35269 517 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC00839-201ENST00000424751 TCHHQ07283 1943 aa16.73■□□□□ 0.27
LINC00839-201ENST00000424751 FOSBP53539 338 aa16.73■□□□□ 0.27
LINC00839-201ENST00000424751 SCRN1Q12765 414 aa16.73■□□□□ 0.27
LINC00839-201ENST00000424751 KRT32Q14532 448 aa16.73■□□□□ 0.27
LINC00839-201ENST00000424751 WDR66Q8TBY9 1149 aa16.73■□□□□ 0.27
LINC00839-201ENST00000424751 CTNNA3Q9UI47 895 aa16.73■□□□□ 0.27
LINC00839-201ENST00000424751 PDS5AQ29RF7 1337 aaKnown RBP16.73■□□□□ 0.27
LINC00839-201ENST00000424751 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 USP17L21D6R901 530 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 CTR9Q6PD62 1173 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 MYL10Q9BUA6 226 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 RTFDC1Q9BY42 306 aaPredicted RBP16.72■□□□□ 0.27
LINC00839-201ENST00000424751 GDPD2Q9HCC8 539 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 SALL1Q9NSC2 1324 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 YDJCA8MPS7 323 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 KDM4AO75164 1064 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 ADCY5O95622 1261 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 ALX1Q15699 326 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 DCP1AQ9NPI6 582 aaPredicted RBP16.72■□□□□ 0.27
LINC00839-201ENST00000424751 USP25Q9UHP3 1055 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 SAP30BPQ9UHR5 308 aaKnown RBP16.72■□□□□ 0.27
LINC00839-201ENST00000424751 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
LINC00839-201ENST00000424751 KIF13BQ9NQT8 1826 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 GJB2P29033 226 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 UBE2HP62256 183 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 PPARAQ07869 468 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 DYNLL2Q96FJ2 89 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 ZNF277Q9NRM2 450 aaPredicted RBP16.71■□□□□ 0.27
LINC00839-201ENST00000424751 TOMM22Q9NS69 142 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 ZSWIM5Q9P217 1185 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 FGD1P98174 961 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 MAPKAPK5Q8IW41 473 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 CCDC144CPQ8IYA2 1237 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 TGFBRAP1Q8WUH2 860 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 DDX11Q96FC9 970 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.27
LINC00839-201ENST00000424751 UBE2Q2LH0YL09 131 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 ECE2O60344 883 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 BTDP43251 543 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 CNKSR1Q969H4 720 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 NMT2O60551 498 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 ZSCAN22P10073 491 aaPredicted RBP16.7■□□□□ 0.26
LINC00839-201ENST00000424751 TMC4Q7Z404 712 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 SLC44A5Q8NCS7 719 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 CHMP4CQ96CF2 233 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 COA1Q9GZY4 146 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 TAOK2Q9UL54 1235 aa16.7■□□□□ 0.26
LINC00839-201ENST00000424751 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.7■□□□□ 0.26
LINC00839-201ENST00000424751 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
LINC00839-201ENST00000424751 TPM3P06753 285 aa16.69■□□□□ 0.26
LINC00839-201ENST00000424751 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
LINC00839-201ENST00000424751 TTLL6Q8N841 843 aa16.69■□□□□ 0.26
LINC00839-201ENST00000424751 NLGN2Q8NFZ4 835 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms