RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RAI14Q9P0K7 980 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 MAST2Q6P0Q8 1798 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 DDTLA6NHG4 134 aaPredicted RBP18.66■□□□□ 0.58
USB1-202ENST00000423271 CD99L2Q8TCZ2 262 aa18.66■□□□□ 0.58
USB1-202ENST00000423271 DBNLQ9UJU6 430 aaKnown RBP18.66■□□□□ 0.58
USB1-202ENST00000423271 RCAN3Q9UKA8 241 aa18.66■□□□□ 0.58
USB1-202ENST00000423271 MYO5AQ9Y4I1 1855 aaKnown RBP18.65■□□□□ 0.58
USB1-202ENST00000423271 CETPP11597 493 aa18.65■□□□□ 0.58
USB1-202ENST00000423271 CAP1Q01518 475 aa18.65■□□□□ 0.58
USB1-202ENST00000423271 PPATQ06203 517 aa18.65■□□□□ 0.58
USB1-202ENST00000423271 SNAPC2Q13487 334 aa18.65■□□□□ 0.58
USB1-202ENST00000423271 TAF1CQ15572 869 aaPredicted RBP18.65■□□□□ 0.58
USB1-202ENST00000423271 NOL9Q5SY16 702 aaKnown RBP18.65■□□□□ 0.58
USB1-202ENST00000423271 FBXO46Q6PJ61 603 aaPredicted RBP18.65■□□□□ 0.58
USB1-202ENST00000423271 OTOP1Q7RTM1 612 aa18.65■□□□□ 0.58
USB1-202ENST00000423271 ZSCAN29Q8IWY8 852 aaPredicted RBP18.65■□□□□ 0.58
USB1-202ENST00000423271 TRIM17Q9Y577 477 aa18.65■□□□□ 0.58
USB1-202ENST00000423271 BTBD19C9JJ37 291 aa18.64■□□□□ 0.57
USB1-202ENST00000423271 GSTO1P78417 241 aa18.64■□□□□ 0.57
USB1-202ENST00000423271 CCDC158Q5M9N0 1113 aa18.64■□□□□ 0.57
USB1-202ENST00000423271 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.64■□□□□ 0.57
USB1-202ENST00000423271 EAF2Q96CJ1 260 aaPredicted RBP18.64■□□□□ 0.57
USB1-202ENST00000423271 CCDC8Q9H0W5 538 aaPredicted RBP18.64■□□□□ 0.57
USB1-202ENST00000423271 LRP2BPQ9P2M1 347 aa18.64■□□□□ 0.57
USB1-202ENST00000423271 EXOC6BQ9Y2D4 811 aa18.64■□□□□ 0.57
USB1-202ENST00000423271 PHF20L1A8MW92 1017 aa18.63■□□□□ 0.57
USB1-202ENST00000423271 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
USB1-202ENST00000423271 LDHCP07864 332 aa18.63■□□□□ 0.57
USB1-202ENST00000423271 SP3Q02447 781 aa18.63■□□□□ 0.57
USB1-202ENST00000423271 MLLT1Q03111 559 aaPredicted RBP18.63■□□□□ 0.57
USB1-202ENST00000423271 ERO1AQ96HE7 468 aa18.63■□□□□ 0.57
USB1-202ENST00000423271 ZFYVE28Q9HCC9 887 aa18.63■□□□□ 0.57
USB1-202ENST00000423271 COG6Q9Y2V7 657 aa18.63■□□□□ 0.57
USB1-202ENST00000423271 CENPFP49454 3210 aa18.62■□□□□ 0.57
USB1-202ENST00000423271 ZAP70P43403 619 aa18.62■□□□□ 0.57
USB1-202ENST00000423271 ZNF512BQ96KM6 892 aaPredicted RBP18.62■□□□□ 0.57
USB1-202ENST00000423271 KCNH4Q9UQ05 1017 aa18.62■□□□□ 0.57
USB1-202ENST00000423271 DOCK1Q14185 1865 aa18.61■□□□□ 0.57
USB1-202ENST00000423271 ZSWIM8A7E2V4 1837 aa18.61■□□□□ 0.57
USB1-202ENST00000423271 MS4A1P11836 297 aa18.61■□□□□ 0.57
USB1-202ENST00000423271 MAP3K10Q02779 954 aa18.61■□□□□ 0.57
USB1-202ENST00000423271 NAA16Q6N069 864 aaPredicted RBP18.61■□□□□ 0.57
USB1-202ENST00000423271 SH3RF3Q8TEJ3 882 aaPredicted RBP18.61■□□□□ 0.57
USB1-202ENST00000423271 PIH1D3Q9NQM4 214 aaKnown RBP18.61■□□□□ 0.57
USB1-202ENST00000423271 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
USB1-202ENST00000423271 NPM3O75607 178 aaKnown RBP18.6■□□□□ 0.57
USB1-202ENST00000423271 MOGSQ13724 837 aa18.6■□□□□ 0.57
USB1-202ENST00000423271 ADGRA1Q86SQ6 560 aa18.6■□□□□ 0.57
USB1-202ENST00000423271 TEX11Q8IYF3 940 aa18.6■□□□□ 0.57
USB1-202ENST00000423271 SCYL3Q8IZE3 742 aa18.6■□□□□ 0.57
USB1-202ENST00000423271 OSBPL5Q9H0X9 879 aaPredicted RBP18.6■□□□□ 0.57
USB1-202ENST00000423271 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.6■□□□□ 0.57
USB1-202ENST00000423271 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
USB1-202ENST00000423271 CDK5RAP2Q96SN8 1893 aa18.59■□□□□ 0.57
USB1-202ENST00000423271 AACSQ86V21 672 aa18.59■□□□□ 0.57
USB1-202ENST00000423271 ERC1Q8IUD2 1116 aa18.59■□□□□ 0.57
USB1-202ENST00000423271 EFCC1Q9HA90 598 aa18.59■□□□□ 0.57
USB1-202ENST00000423271 ZCCHC17Q9NP64 241 aaKnown RBP18.59■□□□□ 0.57
USB1-202ENST00000423271 ZBTB40Q9NUA8 1239 aa18.59■□□□□ 0.57
USB1-202ENST00000423271 AATFQ9NY61 560 aaKnown RBP eCLIP18.59■□□□□ 0.57
USB1-202ENST00000423271 DDX19BQ9UMR2 479 aa18.59■□□□□ 0.57
USB1-202ENST00000423271 NDUFB9Q9Y6M9 179 aa18.59■□□□□ 0.57
USB1-202ENST00000423271 TNRC18O15417 2968 aaPredicted RBP18.59■□□□□ 0.57
USB1-202ENST00000423271 SIPA1L1O43166 1804 aa18.58■□□□□ 0.57
USB1-202ENST00000423271 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.57
USB1-202ENST00000423271 TLR2O60603 784 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 MAP4K4O95819 1239 aaPredicted RBP18.58■□□□□ 0.56
USB1-202ENST00000423271 PTPRAP18433 802 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 ANKRD23Q86SG2 305 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 CCDC84Q86UT8 332 aaPredicted RBP18.58■□□□□ 0.56
USB1-202ENST00000423271 SIRT2Q8IXJ6 389 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 PICK1Q9NRD5 415 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 PTPN22Q9Y2R2 807 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 ZHX2Q9Y6X8 837 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 PTPRFP10586 1907 aa18.58■□□□□ 0.56
USB1-202ENST00000423271 PDHXO00330 501 aa18.57■□□□□ 0.56
USB1-202ENST00000423271 C20orf194Q5TEA3 1177 aa18.57■□□□□ 0.56
USB1-202ENST00000423271 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
USB1-202ENST00000423271 NOL10Q9BSC4 688 aaKnown RBP18.57■□□□□ 0.56
USB1-202ENST00000423271 ARHGAP39Q9C0H5 1083 aa18.57■□□□□ 0.56
USB1-202ENST00000423271 FOCADQ5VW36 1801 aa18.57■□□□□ 0.56
USB1-202ENST00000423271 BRCA2P51587 3418 aa18.56■□□□□ 0.56
USB1-202ENST00000423271 APBB1O00213 710 aa18.56■□□□□ 0.56
USB1-202ENST00000423271 PPP4CP60510 307 aa18.56■□□□□ 0.56
USB1-202ENST00000423271 RPAP2Q8IXW5 612 aaPredicted RBP18.56■□□□□ 0.56
USB1-202ENST00000423271 ANTXR1Q9H6X2 564 aa18.56■□□□□ 0.56
USB1-202ENST00000423271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.56■□□□□ 0.56
USB1-202ENST00000423271 ADGRA2Q96PE1 1338 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 PDE4DIPQ5VU43 2346 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 A0A0G2JLL6 359 aaPredicted RBP18.55■□□□□ 0.56
USB1-202ENST00000423271 CXCL11O14625 94 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 TBC1D12O60347 775 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 CTNND1O60716 968 aaKnown RBP18.55■□□□□ 0.56
USB1-202ENST00000423271 IDH1O75874 414 aaKnown RBP18.55■□□□□ 0.56
USB1-202ENST00000423271 BAG3O95817 575 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 HSP90AB4PQ58FF6 505 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 GPAT2Q6NUI2 795 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 PRRT2Q7Z6L0 340 aaPredicted RBP18.55■□□□□ 0.56
USB1-202ENST00000423271 MAPKAPK5Q8IW41 473 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms