RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 MYH2Q9UKX2 1941 aa10.56□□□□□ -0.72
MDC1-204ENST00000422266 TBC1D12O60347 775 aa10.56□□□□□ -0.72
MDC1-204ENST00000422266 CTNND1O60716 968 aaKnown RBP10.56□□□□□ -0.72
MDC1-204ENST00000422266 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
MDC1-204ENST00000422266 NFIAQ12857 509 aa10.56□□□□□ -0.72
MDC1-204ENST00000422266 TTF1Q15361 905 aaPredicted RBP10.56□□□□□ -0.72
MDC1-204ENST00000422266 MIGA2Q7L4E1 593 aa10.56□□□□□ -0.72
MDC1-204ENST00000422266 DBNDD2Q9BQY9 259 aa10.56□□□□□ -0.72
MDC1-204ENST00000422266 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
MDC1-204ENST00000422266 SNCAIPQ9Y6H5 919 aa10.56□□□□□ -0.72
MDC1-204ENST00000422266 ATRNL1Q5VV63 1379 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 LAMB1P07942 1786 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 AK9Q5TCS8 1911 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 IGF2BP3O00425 579 aaKnown RBP eCLIP10.55□□□□□ -0.72
MDC1-204ENST00000422266 CXCL11O14625 94 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 GJA5P36382 358 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 SP3Q02447 781 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 KIF22Q14807 665 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 TAF1CQ15572 869 aaPredicted RBP10.55□□□□□ -0.72
MDC1-204ENST00000422266 FBXO46Q6PJ61 603 aaPredicted RBP10.55□□□□□ -0.72
MDC1-204ENST00000422266 FASTKD5Q7L8L6 764 aaKnown RBP10.55□□□□□ -0.72
MDC1-204ENST00000422266 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 RHPN1Q8TCX5 695 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 ZKSCAN4Q969J2 545 aaPredicted RBP10.55□□□□□ -0.72
MDC1-204ENST00000422266 HERC5Q9UII4 1024 aaKnown RBP10.55□□□□□ -0.72
MDC1-204ENST00000422266 DBNLQ9UJU6 430 aaKnown RBP10.55□□□□□ -0.72
MDC1-204ENST00000422266 COG6Q9Y2V7 657 aa10.55□□□□□ -0.72
MDC1-204ENST00000422266 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
MDC1-204ENST00000422266 IRF6O14896 467 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 GNRH1P01148 92 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 IFIT2P09913 472 aaKnown RBP10.54□□□□□ -0.72
MDC1-204ENST00000422266 RHBDL3P58872 404 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 PPP4CP60510 307 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 CRHR2Q13324 411 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 PICALMQ13492 652 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 TBC1D9Q6ZT07 1266 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 AACSQ86V21 672 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 TEX11Q8IYF3 940 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 SCYL3Q8IZE3 742 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 BRI3BPQ8WY22 251 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 EAF2Q96CJ1 260 aaPredicted RBP10.54□□□□□ -0.72
MDC1-204ENST00000422266 OSBPL5Q9H0X9 879 aaPredicted RBP10.54□□□□□ -0.72
MDC1-204ENST00000422266 PI4KBQ9UBF8 816 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 KCNH4Q9UQ05 1017 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 EXOC6BQ9Y2D4 811 aa10.54□□□□□ -0.72
MDC1-204ENST00000422266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.54□□□□□ -0.72
MDC1-204ENST00000422266 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 TLR2O60603 784 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 CYP2E1P05181 493 aaPredicted RBP10.53□□□□□ -0.72
MDC1-204ENST00000422266 INPP5BP32019 993 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 RGS19P49795 217 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 PI16Q6UXB8 463 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 ANKRD23Q86SG2 305 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
MDC1-204ENST00000422266 PTPN18Q99952 460 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 TRIM34Q9BYJ4 488 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 CCDC8Q9H0W5 538 aaPredicted RBP10.53□□□□□ -0.72
MDC1-204ENST00000422266 EFCC1Q9HA90 598 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
MDC1-204ENST00000422266 GINM1Q9NU53 330 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 TRIM17Q9Y577 477 aa10.53□□□□□ -0.72
MDC1-204ENST00000422266 OTOFQ9HC10 1997 aa10.52□□□□□ -0.72
MDC1-204ENST00000422266 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 IDH1O75874 414 aaKnown RBP10.52□□□□□ -0.73
MDC1-204ENST00000422266 HLA-DOAP06340 250 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 PTPRAP18433 802 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 ZAP70P43403 619 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 PRMT2P55345 433 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 MLLT1Q03111 559 aaPredicted RBP10.52□□□□□ -0.73
MDC1-204ENST00000422266 NBPF11Q86T75 865 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 FOXP4Q8IVH2 680 aaPredicted RBP10.52□□□□□ -0.73
MDC1-204ENST00000422266 CNKSR2Q8WXI2 1034 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 PARK7Q99497 189 aaKnown RBP10.52□□□□□ -0.73
MDC1-204ENST00000422266 SNRKQ9NRH2 765 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 AATFQ9NY61 560 aaKnown RBP eCLIP10.52□□□□□ -0.73
MDC1-204ENST00000422266 SLC45A1Q9Y2W3 748 aa10.52□□□□□ -0.73
MDC1-204ENST00000422266 DDTLA6NHG4 134 aaPredicted RBP10.51□□□□□ -0.73
MDC1-204ENST00000422266 BTBD19C9JJ37 291 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 CYP7A1P22680 504 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 HOXD10P28358 340 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 OTOP1Q7RTM1 612 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 ZFPM1Q8IX07 1006 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 FAM43AQ8N2R8 423 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 ZNF384Q8TF68 577 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 AS3MTQ9HBK9 375 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 DDX4Q9NQI0 724 aaKnown RBP10.51□□□□□ -0.73
MDC1-204ENST00000422266 TAOK2Q9UL54 1235 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 ZHX2Q9Y6X8 837 aa10.51□□□□□ -0.73
MDC1-204ENST00000422266 A0A0G2JLL6 359 aaPredicted RBP10.5□□□□□ -0.73
MDC1-204ENST00000422266 PDHXO00330 501 aa10.5□□□□□ -0.73
MDC1-204ENST00000422266 ASNSP08243 561 aa10.5□□□□□ -0.73
MDC1-204ENST00000422266 USP5P45974 858 aa10.5□□□□□ -0.73
MDC1-204ENST00000422266 PABPC4Q13310 644 aaKnown RBP eCLIP10.5□□□□□ -0.73
MDC1-204ENST00000422266 SH3BP5LQ7L8J4 393 aa10.5□□□□□ -0.73
MDC1-204ENST00000422266 PRRT2Q7Z6L0 340 aaPredicted RBP10.5□□□□□ -0.73
MDC1-204ENST00000422266 CRACR2BQ8N4Y2 399 aaPredicted RBP10.5□□□□□ -0.73
MDC1-204ENST00000422266 SH3RF3Q8TEJ3 882 aaPredicted RBP10.5□□□□□ -0.73
MDC1-204ENST00000422266 TGFBRAP1Q8WUH2 860 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms