RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 CLASRPQ8N2M8 674 aaKnown RBP22.08■■□□□ 1.13
UBXN11-208ENST00000421827 OTUD5Q96G74 571 aa22.08■■□□□ 1.13
UBXN11-208ENST00000421827 ABHD8Q96I13 439 aa22.08■■□□□ 1.13
UBXN11-208ENST00000421827 MS4A4AQ96JQ5 239 aa22.08■■□□□ 1.13
UBXN11-208ENST00000421827 ZNF112Q9UJU3 913 aa22.08■■□□□ 1.13
UBXN11-208ENST00000421827 LAMB1P07942 1786 aa22.07■■□□□ 1.12
UBXN11-208ENST00000421827 INPP5BP32019 993 aa22.07■■□□□ 1.12
UBXN11-208ENST00000421827 DGKZQ13574 1117 aa22.07■■□□□ 1.12
UBXN11-208ENST00000421827 NOM1Q5C9Z4 860 aaKnown RBP22.07■■□□□ 1.12
UBXN11-208ENST00000421827 OTUD7BQ6GQQ9 843 aa22.07■■□□□ 1.12
UBXN11-208ENST00000421827 ZSCAN29Q8IWY8 852 aaPredicted RBP22.07■■□□□ 1.12
UBXN11-208ENST00000421827 YTHDC1Q96MU7 727 aaKnown RBP22.07■■□□□ 1.12
UBXN11-208ENST00000421827 NOL10Q9BSC4 688 aaKnown RBP22.07■■□□□ 1.12
UBXN11-208ENST00000421827 MCOLN1Q9GZU1 580 aa22.07■■□□□ 1.12
UBXN11-208ENST00000421827 PIH1D3Q9NQM4 214 aaKnown RBP22.07■■□□□ 1.12
UBXN11-208ENST00000421827 DDTLA6NHG4 134 aaPredicted RBP22.06■■□□□ 1.12
UBXN11-208ENST00000421827 GPR25O00155 361 aa22.06■■□□□ 1.12
UBXN11-208ENST00000421827 NPM3O75607 178 aaKnown RBP22.06■■□□□ 1.12
UBXN11-208ENST00000421827 GTF2A2P52657 109 aa22.06■■□□□ 1.12
UBXN11-208ENST00000421827 SH3BP5LQ7L8J4 393 aa22.06■■□□□ 1.12
UBXN11-208ENST00000421827 PTPN18Q99952 460 aa22.06■■□□□ 1.12
UBXN11-208ENST00000421827 R3HDMLQ9H3Y0 253 aa22.06■■□□□ 1.12
UBXN11-208ENST00000421827 ATRNL1Q5VV63 1379 aa22.06■■□□□ 1.12
UBXN11-208ENST00000421827 ZNF296Q8WUU4 475 aaPredicted RBP22.05■■□□□ 1.12
UBXN11-208ENST00000421827 CCL15-CCL14A0A0B4J2E2 113 aa22.04■■□□□ 1.12
UBXN11-208ENST00000421827 BAG3O95817 575 aa22.04■■□□□ 1.12
UBXN11-208ENST00000421827 IFIT2P09913 472 aaKnown RBP22.04■■□□□ 1.12
UBXN11-208ENST00000421827 PPIL2Q13356 520 aa22.04■■□□□ 1.12
UBXN11-208ENST00000421827 CCL15Q16663 113 aa22.04■■□□□ 1.12
UBXN11-208ENST00000421827 TEX11Q8IYF3 940 aa22.04■■□□□ 1.12
UBXN11-208ENST00000421827 BRI3BPQ8WY22 251 aa22.04■■□□□ 1.12
UBXN11-208ENST00000421827 NDUFB9Q9Y6M9 179 aa22.04■■□□□ 1.12
UBXN11-208ENST00000421827 MAST2Q6P0Q8 1798 aa22.04■■□□□ 1.12
UBXN11-208ENST00000421827 PLCG2P16885 1265 aa22.03■■□□□ 1.12
UBXN11-208ENST00000421827 PPP4CP60510 307 aa22.03■■□□□ 1.12
UBXN11-208ENST00000421827 MAP3K10Q02779 954 aa22.03■■□□□ 1.12
UBXN11-208ENST00000421827 PPATQ06203 517 aa22.03■■□□□ 1.12
UBXN11-208ENST00000421827 NOL9Q5SY16 702 aaKnown RBP22.03■■□□□ 1.12
UBXN11-208ENST00000421827 CTU1Q7Z7A3 348 aaKnown RBP22.03■■□□□ 1.12
UBXN11-208ENST00000421827 SH3RF3Q8TEJ3 882 aaPredicted RBP22.03■■□□□ 1.12
UBXN11-208ENST00000421827 AATFQ9NY61 560 aaKnown RBP eCLIP22.03■■□□□ 1.12
UBXN11-208ENST00000421827 DOCK2Q92608 1830 aa22.02■■□□□ 1.12
UBXN11-208ENST00000421827 PHF20L1A8MW92 1017 aa22.02■■□□□ 1.12
UBXN11-208ENST00000421827 IRF6O14896 467 aa22.02■■□□□ 1.12
UBXN11-208ENST00000421827 FKTNO75072 461 aa22.02■■□□□ 1.12
UBXN11-208ENST00000421827 IDH1O75874 414 aaKnown RBP22.02■■□□□ 1.12
UBXN11-208ENST00000421827 SNAPC2Q13487 334 aa22.02■■□□□ 1.12
UBXN11-208ENST00000421827 ADGRA1Q86SQ6 560 aa22.02■■□□□ 1.12
UBXN11-208ENST00000421827 OSBPL5Q9H0X9 879 aaPredicted RBP22.02■■□□□ 1.12
UBXN11-208ENST00000421827 BCL11AQ9H165 835 aa22.02■■□□□ 1.12
UBXN11-208ENST00000421827 CETPP11597 493 aa22.01■■□□□ 1.11
UBXN11-208ENST00000421827 RRP1P56182 461 aaKnown RBP22.01■■□□□ 1.11
UBXN11-208ENST00000421827 ANTXR1Q9H6X2 564 aa22.01■■□□□ 1.11
UBXN11-208ENST00000421827 MYO5AQ9Y4I1 1855 aaKnown RBP22■■□□□ 1.11
UBXN11-208ENST00000421827 CYP7A1P22680 504 aa22■■□□□ 1.11
UBXN11-208ENST00000421827 CRHR2Q13324 411 aa22■■□□□ 1.11
UBXN11-208ENST00000421827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22■■□□□ 1.11
UBXN11-208ENST00000421827 COL2A1P02458 1487 aaPredicted RBP22■■□□□ 1.11
UBXN11-208ENST00000421827 TBC1D12O60347 775 aa21.99■■□□□ 1.11
UBXN11-208ENST00000421827 SLURP2P0DP57 97 aa21.99■■□□□ 1.11
UBXN11-208ENST00000421827 MAP3K12Q12852 859 aa21.99■■□□□ 1.11
UBXN11-208ENST00000421827 FAM43AQ8N2R8 423 aa21.99■■□□□ 1.11
UBXN11-208ENST00000421827 MAGEB6Q8N7X4 407 aa21.99■■□□□ 1.11
UBXN11-208ENST00000421827 LRRCC1Q9C099 1032 aa21.99■■□□□ 1.11
UBXN11-208ENST00000421827 TTF1Q15361 905 aaPredicted RBP21.98■■□□□ 1.11
UBXN11-208ENST00000421827 TMED8Q6PL24 325 aaPredicted RBP21.98■■□□□ 1.11
UBXN11-208ENST00000421827 SCYL3Q8IZE3 742 aa21.98■■□□□ 1.11
UBXN11-208ENST00000421827 TGFBRAP1Q8WUH2 860 aa21.98■■□□□ 1.11
UBXN11-208ENST00000421827 KCNH4Q9UQ05 1017 aa21.98■■□□□ 1.11
UBXN11-208ENST00000421827 CTNND1O60716 968 aaKnown RBP21.97■■□□□ 1.11
UBXN11-208ENST00000421827 DYNLL1P63167 89 aaKnown RBP21.97■■□□□ 1.11
UBXN11-208ENST00000421827 TAF1CQ15572 869 aaPredicted RBP21.97■■□□□ 1.11
UBXN11-208ENST00000421827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.97■■□□□ 1.11
UBXN11-208ENST00000421827 PICK1Q9NRD5 415 aa21.97■■□□□ 1.11
UBXN11-208ENST00000421827 CCDC85CA6NKD9 419 aa21.96■■□□□ 1.11
UBXN11-208ENST00000421827 BTBD19C9JJ37 291 aa21.96■■□□□ 1.11
UBXN11-208ENST00000421827 PTPRAP18433 802 aa21.96■■□□□ 1.11
UBXN11-208ENST00000421827 CERS3Q8IU89 383 aa21.96■■□□□ 1.11
UBXN11-208ENST00000421827 MAPKAPK5Q8IW41 473 aa21.96■■□□□ 1.11
UBXN11-208ENST00000421827 MIGA1Q8NAN2 632 aa21.96■■□□□ 1.11
UBXN11-208ENST00000421827 DNAJC2Q99543 621 aaKnown RBP21.96■■□□□ 1.11
UBXN11-208ENST00000421827 DHX36Q9H2U1 1008 aaKnown RBP21.96■■□□□ 1.11
UBXN11-208ENST00000421827 ZFYVE28Q9HCC9 887 aa21.96■■□□□ 1.11
UBXN11-208ENST00000421827 ZCCHC17Q9NP64 241 aaKnown RBP21.96■■□□□ 1.11
UBXN11-208ENST00000421827 FLT1P17948 1338 aa21.96■■□□□ 1.11
UBXN11-208ENST00000421827 FAM196BA6NMK8 535 aa21.95■■□□□ 1.1
UBXN11-208ENST00000421827 PKN2Q16513 984 aaKnown RBP21.95■■□□□ 1.1
UBXN11-208ENST00000421827 DCTPP1Q9H773 170 aa21.95■■□□□ 1.1
UBXN11-208ENST00000421827 ZHX2Q9Y6X8 837 aa21.95■■□□□ 1.1
UBXN11-208ENST00000421827 GOLIM4O00461 696 aa21.94■■□□□ 1.1
UBXN11-208ENST00000421827 CXCL11O14625 94 aa21.94■■□□□ 1.1
UBXN11-208ENST00000421827 SMARCA5O60264 1052 aaPredicted RBP21.94■■□□□ 1.1
UBXN11-208ENST00000421827 ATP5JP18859 108 aa21.94■■□□□ 1.1
UBXN11-208ENST00000421827 PI4KBQ9UBF8 816 aa21.94■■□□□ 1.1
UBXN11-208ENST00000421827 HERC5Q9UII4 1024 aaKnown RBP21.94■■□□□ 1.1
UBXN11-208ENST00000421827 SLC9C2Q5TAH2 1124 aa21.93■■□□□ 1.1
UBXN11-208ENST00000421827 BOLA2Q9H3K6 86 aa21.93■■□□□ 1.1
UBXN11-208ENST00000421827 PCDHB15Q9Y5E8 787 aa21.93■■□□□ 1.1
UBXN11-208ENST00000421827 PDE6AP16499 860 aa21.92■■□□□ 1.1
UBXN11-208ENST00000421827 SP3Q02447 781 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms