RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CHADLQ6NUI6 762 aa21.02■□□□□ 0.96
LINC00271-201ENST00000421378 CDC37L1Q7L3B6 337 aa21.02■□□□□ 0.96
LINC00271-201ENST00000421378 MAPKAPK5Q8IW41 473 aa21.02■□□□□ 0.96
LINC00271-201ENST00000421378 NAV1Q8NEY1 1877 aa21.02■□□□□ 0.96
LINC00271-201ENST00000421378 SGSM2O43147 1006 aa21.02■□□□□ 0.95
LINC00271-201ENST00000421378 DDRGK1Q96HY6 314 aa21.02■□□□□ 0.95
LINC00271-201ENST00000421378 OSBPL5Q9H0X9 879 aaPredicted RBP21.02■□□□□ 0.95
LINC00271-201ENST00000421378 ATP8A2Q9NTI2 1148 aa21.02■□□□□ 0.95
LINC00271-201ENST00000421378 PPP2R3BQ9Y5P8 575 aa21.02■□□□□ 0.95
LINC00271-201ENST00000421378 ADM5C9JUS6 153 aa21.01■□□□□ 0.95
LINC00271-201ENST00000421378 TOMM70O94826 608 aa21.01■□□□□ 0.95
LINC00271-201ENST00000421378 APPP05067 770 aa21.01■□□□□ 0.95
LINC00271-201ENST00000421378 FAM151AQ8WW52 585 aa21.01■□□□□ 0.95
LINC00271-201ENST00000421378 ESYT1Q9BSJ8 1104 aa21.01■□□□□ 0.95
LINC00271-201ENST00000421378 GLIS2Q9BZE0 524 aaPredicted RBP21.01■□□□□ 0.95
LINC00271-201ENST00000421378 TMEM39BQ9GZU3 492 aa21.01■□□□□ 0.95
LINC00271-201ENST00000421378 DCP1AQ9NPI6 582 aaPredicted RBP21.01■□□□□ 0.95
LINC00271-201ENST00000421378 DDX60LQ5H9U9 1706 aaKnown RBP21■□□□□ 0.95
LINC00271-201ENST00000421378 VPS53Q5VIR6 699 aa21■□□□□ 0.95
LINC00271-201ENST00000421378 MKRN1Q9UHC7 482 aaKnown RBP21■□□□□ 0.95
LINC00271-201ENST00000421378 RPAP1Q9BWH6 1393 aaPredicted RBP21■□□□□ 0.95
LINC00271-201ENST00000421378 COL2A1P02458 1487 aaPredicted RBP20.99■□□□□ 0.95
LINC00271-201ENST00000421378 GSG1L2A8MUP6 293 aa20.99■□□□□ 0.95
LINC00271-201ENST00000421378 PATL2C9JE40 543 aaKnown RBP20.99■□□□□ 0.95
LINC00271-201ENST00000421378 USP48Q86UV5 1035 aa20.99■□□□□ 0.95
LINC00271-201ENST00000421378 ZSCAN29Q8IWY8 852 aaPredicted RBP20.99■□□□□ 0.95
LINC00271-201ENST00000421378 ZFPM1Q8IX07 1006 aa20.99■□□□□ 0.95
LINC00271-201ENST00000421378 SMC1BQ8NDV3 1235 aa20.99■□□□□ 0.95
LINC00271-201ENST00000421378 NACAP1Q9BZK3 213 aa20.99■□□□□ 0.95
LINC00271-201ENST00000421378 FOXP2O15409 715 aa20.98■□□□□ 0.95
LINC00271-201ENST00000421378 HSPD1P10809 573 aaKnown RBP20.98■□□□□ 0.95
LINC00271-201ENST00000421378 GIMAP6Q6P9H5 292 aa20.98■□□□□ 0.95
LINC00271-201ENST00000421378 RBM46Q8TBY0 533 aaKnown RBP20.98■□□□□ 0.95
LINC00271-201ENST00000421378 EPB41L4AQ9HCS5 686 aaPredicted RBP20.98■□□□□ 0.95
LINC00271-201ENST00000421378 MCM9Q9NXL9 1143 aa20.98■□□□□ 0.95
LINC00271-201ENST00000421378 ATRNL1Q5VV63 1379 aa20.98■□□□□ 0.95
LINC00271-201ENST00000421378 SAP30BPQ9UHR5 308 aaKnown RBP20.97■□□□□ 0.95
LINC00271-201ENST00000421378 MYH1P12882 1939 aa20.97■□□□□ 0.95
LINC00271-201ENST00000421378 BAZ2AQ9UIF9 1905 aaKnown RBP20.97■□□□□ 0.95
LINC00271-201ENST00000421378 TDO2P48775 406 aa20.97■□□□□ 0.95
LINC00271-201ENST00000421378 PRAMEF18Q5VWM3 479 aa20.97■□□□□ 0.95
LINC00271-201ENST00000421378 IFNL3Q8IZI9 196 aa20.97■□□□□ 0.95
LINC00271-201ENST00000421378 TEPSINQ96N21 525 aa20.97■□□□□ 0.95
LINC00271-201ENST00000421378 CSRNP1Q96S65 589 aa20.97■□□□□ 0.95
LINC00271-201ENST00000421378 NAPBQ9H115 298 aa20.97■□□□□ 0.95
LINC00271-201ENST00000421378 DHX36Q9H2U1 1008 aaKnown RBP20.97■□□□□ 0.95
LINC00271-201ENST00000421378 PALD1Q9ULE6 856 aa20.97■□□□□ 0.95
LINC00271-201ENST00000421378 DDTLA6NHG4 134 aaPredicted RBP20.96■□□□□ 0.95
LINC00271-201ENST00000421378 DLK2Q6UY11 383 aa20.96■□□□□ 0.95
LINC00271-201ENST00000421378 KIAA1211Q6ZU35 1233 aa20.96■□□□□ 0.95
LINC00271-201ENST00000421378 CDAN1Q8IWY9 1227 aa20.96■□□□□ 0.95
LINC00271-201ENST00000421378 AMOTL1Q8IY63 956 aa20.96■□□□□ 0.95
LINC00271-201ENST00000421378 DSCC1Q9BVC3 393 aa20.96■□□□□ 0.95
LINC00271-201ENST00000421378 ARPP21Q9UBL0 812 aaPredicted RBP20.96■□□□□ 0.95
LINC00271-201ENST00000421378 TRAF5O00463 557 aa20.95■□□□□ 0.94
LINC00271-201ENST00000421378 SLC4A8Q2Y0W8 1093 aa20.95■□□□□ 0.94
LINC00271-201ENST00000421378 SH3BP5LQ7L8J4 393 aa20.95■□□□□ 0.94
LINC00271-201ENST00000421378 CDCA5Q96FF9 252 aa20.95■□□□□ 0.94
LINC00271-201ENST00000421378 ANO2Q9NQ90 1003 aa20.95■□□□□ 0.94
LINC00271-201ENST00000421378 ZMYM6O95789 1325 aa20.95■□□□□ 0.94
LINC00271-201ENST00000421378 ITGBL1O95965 494 aaPredicted RBP20.94■□□□□ 0.94
LINC00271-201ENST00000421378 POLR3DP05423 398 aaPredicted RBP20.94■□□□□ 0.94
LINC00271-201ENST00000421378 HLA-DOAP06340 250 aa20.94■□□□□ 0.94
LINC00271-201ENST00000421378 USP17L12C9JPN9 530 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 USP17L21D6R901 530 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 SUPT20HL1Q3ZLR7 823 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 NBPF12Q5TAG4 269 aaPredicted RBP20.93■□□□□ 0.94
LINC00271-201ENST00000421378 CTR9Q6PD62 1173 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 TTC6Q86TZ1 520 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 PI4KBQ9UBF8 816 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 LAMB1P07942 1786 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 FGAP02671 866 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 NF2P35240 595 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 FSTL1Q12841 308 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 ALX1Q15699 326 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 HOOK2Q96ED9 719 aa20.93■□□□□ 0.94
LINC00271-201ENST00000421378 SSC5DA1L4H1 1573 aa20.92■□□□□ 0.94
LINC00271-201ENST00000421378 REC8O95072 547 aa20.92■□□□□ 0.94
LINC00271-201ENST00000421378 PTH1RQ03431 593 aa20.92■□□□□ 0.94
LINC00271-201ENST00000421378 LSG1Q9H089 658 aaKnown RBP20.92■□□□□ 0.94
LINC00271-201ENST00000421378 PLCD1P51178 756 aa20.91■□□□□ 0.94
LINC00271-201ENST00000421378 FMR1Q06787 632 aaKnown RBP eCLIP20.91■□□□□ 0.94
LINC00271-201ENST00000421378 C8orf34Q49A92 452 aa20.91■□□□□ 0.94
LINC00271-201ENST00000421378 SBK1Q52WX2 424 aa20.91■□□□□ 0.94
LINC00271-201ENST00000421378 C12orf60Q5U649 245 aa20.91■□□□□ 0.94
LINC00271-201ENST00000421378 ZNF408Q9H9D4 720 aa20.91■□□□□ 0.94
LINC00271-201ENST00000421378 SIPA1L1O43166 1804 aa20.91■□□□□ 0.94
LINC00271-201ENST00000421378 CYP2D7A0A087X1C5 515 aa20.9■□□□□ 0.94
LINC00271-201ENST00000421378 MINDY4BA8MYZ0 360 aa20.9■□□□□ 0.94
LINC00271-201ENST00000421378 CYP2D6P10635 497 aa20.9■□□□□ 0.94
LINC00271-201ENST00000421378 CRACR2BQ8N4Y2 399 aaPredicted RBP20.9■□□□□ 0.94
LINC00271-201ENST00000421378 MAP4K1Q92918 833 aa20.9■□□□□ 0.94
LINC00271-201ENST00000421378 EHD4Q9H223 541 aa20.9■□□□□ 0.94
LINC00271-201ENST00000421378 CTNNA3Q9UI47 895 aa20.9■□□□□ 0.94
LINC00271-201ENST00000421378 SERPINB13Q9UIV8 391 aa20.9■□□□□ 0.94
LINC00271-201ENST00000421378 PASKQ96RG2 1323 aa20.9■□□□□ 0.94
LINC00271-201ENST00000421378 EVX2Q03828 476 aa20.89■□□□□ 0.94
LINC00271-201ENST00000421378 DCAF15Q66K64 600 aa20.89■□□□□ 0.94
LINC00271-201ENST00000421378 MIGA2Q7L4E1 593 aa20.89■□□□□ 0.94
LINC00271-201ENST00000421378 TRIM34Q9BYJ4 488 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms