RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 BACH2Q9BYV9 841 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 ZBTB40Q9NUA8 1239 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 STRCQ7RTU9 1775 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 SPATA31A3Q5VYP0 1347 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 LMO7Q8WWI1 1683 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 PXDNQ92626 1479 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 CEMIPQ8WUJ3 1361 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 FZD6O60353 706 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 THBS1P07996 1170 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 TEFQ10587 303 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 NBPF6Q5VWK0 638 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 TTC16Q8NEE8 873 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 GPR152Q8TDT2 470 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 EDEM1Q92611 657 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 GCC1Q96CN9 775 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 NBPF4Q96M43 638 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 BRD7Q9NPI1 651 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 CCDC87Q9NVE4 849 aa9.03□□□□□ -0.96
EPHA4-205ENST00000419964 NXF1Q9UBU9 619 aaKnown RBP9.03□□□□□ -0.96
EPHA4-205ENST00000419964 CDC14CA4D256 554 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 HSP90AB1P08238 724 aaKnown RBP9.02□□□□□ -0.97
EPHA4-205ENST00000419964 CCT4P50991 539 aaKnown RBP9.02□□□□□ -0.97
EPHA4-205ENST00000419964 LAMC2Q13753 1193 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
EPHA4-205ENST00000419964 INTS3Q68E01 1043 aaKnown RBP9.02□□□□□ -0.97
EPHA4-205ENST00000419964 SV2AQ7L0J3 742 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.97
EPHA4-205ENST00000419964 NPAS3Q8IXF0 933 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 RGL4Q8IZJ4 473 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 TSPYL6Q8N831 410 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 RAPGEF4Q8WZA2 1011 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 GTPBP3Q969Y2 492 aaKnown RBP9.02□□□□□ -0.97
EPHA4-205ENST00000419964 TRERF1Q96PN7 1200 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 PHF24Q9UPV7 400 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 SPG7Q9UQ90 795 aa9.02□□□□□ -0.97
EPHA4-205ENST00000419964 RTCBQ9Y3I0 505 aaKnown RBP9.02□□□□□ -0.97
EPHA4-205ENST00000419964 ELL2O00472 640 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-205ENST00000419964 KHNYNO15037 678 aaKnown RBP9.01□□□□□ -0.97
EPHA4-205ENST00000419964 IGHDP01880 384 aa9.01□□□□□ -0.97
EPHA4-205ENST00000419964 PDGFAP04085 211 aa9.01□□□□□ -0.97
EPHA4-205ENST00000419964 ERCC3P19447 782 aa9.01□□□□□ -0.97
EPHA4-205ENST00000419964 TNP2Q05952 138 aa9.01□□□□□ -0.97
EPHA4-205ENST00000419964 ZNF530Q6P9A1 599 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-205ENST00000419964 VWA5B2Q8N398 1253 aa9.01□□□□□ -0.97
EPHA4-205ENST00000419964 NANOS1Q8WY41 292 aaKnown RBP9.01□□□□□ -0.97
EPHA4-205ENST00000419964 RBCK1Q9BYM8 510 aa9.01□□□□□ -0.97
EPHA4-205ENST00000419964 C11orf16Q9NQ32 467 aa9.01□□□□□ -0.97
EPHA4-205ENST00000419964 ATXN7L1Q9ULK2 861 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-205ENST00000419964 POLIQ9UNA4 740 aa9.01□□□□□ -0.97
EPHA4-205ENST00000419964 FNDC3AQ9Y2H6 1198 aaKnown RBP9.01□□□□□ -0.97
EPHA4-205ENST00000419964 DCDC2BA2VCK2 349 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 EFSO43281 561 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 BNIP3LO60238 219 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 KCNQ4P56696 695 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 XPCQ01831 940 aaPredicted RBP9□□□□□ -0.97
EPHA4-205ENST00000419964 BRINP3Q76B58 766 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 RPAP2Q8IXW5 612 aaPredicted RBP9□□□□□ -0.97
EPHA4-205ENST00000419964 SMC5Q8IY18 1101 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 CMTR1Q8N1G2 835 aaKnown RBP9□□□□□ -0.97
EPHA4-205ENST00000419964 CFHR5Q9BXR6 569 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 UPF2Q9HAU5 1272 aaKnown RBP9□□□□□ -0.97
EPHA4-205ENST00000419964 NDFIP2Q9NV92 336 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 KCNH4Q9UQ05 1017 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 HDAC5Q9UQL6 1122 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 PXDNLA1KZ92 1463 aa9□□□□□ -0.97
EPHA4-205ENST00000419964 XIRP1Q702N8 1843 aaKnown RBP9□□□□□ -0.97
EPHA4-205ENST00000419964 MAPTP10636 758 aaKnown RBP8.99□□□□□ -0.97
EPHA4-205ENST00000419964 RGS3P49796 1198 aa8.99□□□□□ -0.97
EPHA4-205ENST00000419964 EHHADHQ08426 723 aa8.99□□□□□ -0.97
EPHA4-205ENST00000419964 IL17REQ8NFR9 667 aa8.99□□□□□ -0.97
EPHA4-205ENST00000419964 ABHD17AQ96GS6 310 aa8.99□□□□□ -0.97
EPHA4-205ENST00000419964 ASB16Q96NS5 453 aa8.99□□□□□ -0.97
EPHA4-205ENST00000419964 CACNA1FO60840 1977 aa8.99□□□□□ -0.97
EPHA4-205ENST00000419964 CRYBG1Q9Y4K1 1723 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 HMMRO75330 724 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 GNAI3P08754 354 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 ZC3H6P61129 1189 aaKnown RBP8.98□□□□□ -0.97
EPHA4-205ENST00000419964 GJD3Q8N144 294 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 USHBP1Q8N6Y0 703 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 DMRTB1Q96MA1 342 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 NLRP2Q9NX02 1062 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 MARK1Q9P0L2 795 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 TNNQ9UQP3 1299 aa8.98□□□□□ -0.97
EPHA4-205ENST00000419964 BTBD11A6QL63 1104 aa8.97□□□□□ -0.97
EPHA4-205ENST00000419964 RNMTO43148 476 aaKnown RBP8.97□□□□□ -0.97
EPHA4-205ENST00000419964 SFSWAPQ12872 951 aaKnown RBP8.97□□□□□ -0.97
EPHA4-205ENST00000419964 C8orf34Q49A92 452 aa8.97□□□□□ -0.97
EPHA4-205ENST00000419964 DNAJC14Q6Y2X3 702 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-205ENST00000419964 IFNL2Q8IZJ0 200 aa8.97□□□□□ -0.97
EPHA4-205ENST00000419964 LRRC59Q96AG4 307 aaKnown RBP8.97□□□□□ -0.97
EPHA4-205ENST00000419964 IPO9Q96P70 1041 aaKnown RBP8.97□□□□□ -0.97
EPHA4-205ENST00000419964 USP20Q9Y2K6 914 aa8.97□□□□□ -0.97
EPHA4-205ENST00000419964 ZNF335Q9H4Z2 1342 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-205ENST00000419964 NHSL1Q5SYE7 1610 aa8.97□□□□□ -0.97
EPHA4-205ENST00000419964 ADAMTS7Q9UKP4 1686 aa8.97□□□□□ -0.97
EPHA4-205ENST00000419964 COL18A1P39060 1754 aa8.96□□□□□ -0.97
EPHA4-205ENST00000419964 KDM3BQ7LBC6 1761 aa8.96□□□□□ -0.97
EPHA4-205ENST00000419964 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.98
EPHA4-205ENST00000419964 H3BM21 787 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms