RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 NDUFB9Q9Y6M9 179 aa11.79□□□□□ -0.52
CTSA-205ENST00000419493 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
CTSA-205ENST00000419493 DDTLA6NHG4 134 aaPredicted RBP11.78□□□□□ -0.52
CTSA-205ENST00000419493 WDHD1O75717 1129 aaPredicted RBP11.78□□□□□ -0.52
CTSA-205ENST00000419493 PLCG2P16885 1265 aa11.78□□□□□ -0.52
CTSA-205ENST00000419493 CYP7A1P22680 504 aa11.78□□□□□ -0.52
CTSA-205ENST00000419493 INPP5BP32019 993 aa11.78□□□□□ -0.52
CTSA-205ENST00000419493 RRP1P56182 461 aaKnown RBP11.78□□□□□ -0.52
CTSA-205ENST00000419493 RHBDL3P58872 404 aa11.78□□□□□ -0.52
CTSA-205ENST00000419493 MAP3K12Q12852 859 aa11.78□□□□□ -0.52
CTSA-205ENST00000419493 ERO1BQ86YB8 467 aa11.78□□□□□ -0.52
CTSA-205ENST00000419493 DNAJC2Q99543 621 aaKnown RBP11.78□□□□□ -0.52
CTSA-205ENST00000419493 DDX4Q9NQI0 724 aaKnown RBP11.78□□□□□ -0.52
CTSA-205ENST00000419493 PIH1D3Q9NQM4 214 aaKnown RBP11.78□□□□□ -0.52
CTSA-205ENST00000419493 CCL15-CCL14A0A0B4J2E2 113 aa11.77□□□□□ -0.53
CTSA-205ENST00000419493 GPR25O00155 361 aa11.77□□□□□ -0.53
CTSA-205ENST00000419493 MAP4K4O95819 1239 aaPredicted RBP11.77□□□□□ -0.53
CTSA-205ENST00000419493 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
CTSA-205ENST00000419493 CCL15Q16663 113 aa11.77□□□□□ -0.53
CTSA-205ENST00000419493 MAGEB6Q8N7X4 407 aa11.77□□□□□ -0.53
CTSA-205ENST00000419493 SH3RF3Q8TEJ3 882 aaPredicted RBP11.77□□□□□ -0.53
CTSA-205ENST00000419493 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
CTSA-205ENST00000419493 ZNF296Q8WUU4 475 aaPredicted RBP11.77□□□□□ -0.53
CTSA-205ENST00000419493 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.53
CTSA-205ENST00000419493 ANTXR1Q9H6X2 564 aa11.77□□□□□ -0.53
CTSA-205ENST00000419493 SNCAIPQ9Y6H5 919 aa11.77□□□□□ -0.53
CTSA-205ENST00000419493 SPDYE5A6NIY4 337 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 IGF2BP3O00425 579 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTSA-205ENST00000419493 IRF6O14896 467 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 CETPP11597 493 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 SNAPC2Q13487 334 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 SH3BP5LQ7L8J4 393 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 ABHD8Q96I13 439 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 MCOLN1Q9GZU1 580 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTSA-205ENST00000419493 PICK1Q9NRD5 415 aa11.76□□□□□ -0.53
CTSA-205ENST00000419493 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 GOLIM4O00461 696 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
CTSA-205ENST00000419493 IGSF3O75054 1194 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 FKTNO75072 461 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 SLURP2P0DP57 97 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 DYNLL1P63167 89 aaKnown RBP11.75□□□□□ -0.53
CTSA-205ENST00000419493 PPATQ06203 517 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 ADGRA1Q86SQ6 560 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 MAPKAPK5Q8IW41 473 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 MIGA1Q8NAN2 632 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 PTPN18Q99952 460 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 TRIM34Q9BYJ4 488 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 OSBPL5Q9H0X9 879 aaPredicted RBP11.75□□□□□ -0.53
CTSA-205ENST00000419493 BOLA2Q9H3K6 86 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 R3HDMLQ9H3Y0 253 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 ZNF112Q9UJU3 913 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 OTOFQ9HC10 1997 aa11.75□□□□□ -0.53
CTSA-205ENST00000419493 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
CTSA-205ENST00000419493 NPM3O75607 178 aaKnown RBP11.74□□□□□ -0.53
CTSA-205ENST00000419493 USP5P45974 858 aa11.74□□□□□ -0.53
CTSA-205ENST00000419493 PPP4CP60510 307 aa11.74□□□□□ -0.53
CTSA-205ENST00000419493 CRHR2Q13324 411 aa11.74□□□□□ -0.53
CTSA-205ENST00000419493 PPIL2Q13356 520 aa11.74□□□□□ -0.53
CTSA-205ENST00000419493 TAF1CQ15572 869 aaPredicted RBP11.74□□□□□ -0.53
CTSA-205ENST00000419493 SLC9C2Q5TAH2 1124 aa11.74□□□□□ -0.53
CTSA-205ENST00000419493 CTU1Q7Z7A3 348 aaKnown RBP11.74□□□□□ -0.53
CTSA-205ENST00000419493 SCYL3Q8IZE3 742 aa11.74□□□□□ -0.53
CTSA-205ENST00000419493 BRI3BPQ8WY22 251 aa11.74□□□□□ -0.53
CTSA-205ENST00000419493 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
CTSA-205ENST00000419493 ZFYVE28Q9HCC9 887 aa11.74□□□□□ -0.53
CTSA-205ENST00000419493 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
CTSA-205ENST00000419493 FAM196BA6NMK8 535 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 TBC1D12O60347 775 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
CTSA-205ENST00000419493 SLC4A8Q2Y0W8 1093 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 NOL9Q5SY16 702 aaKnown RBP11.73□□□□□ -0.53
CTSA-205ENST00000419493 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 FAM43AQ8N2R8 423 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 CRACR2BQ8N4Y2 399 aaPredicted RBP11.73□□□□□ -0.53
CTSA-205ENST00000419493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
CTSA-205ENST00000419493 CRBNQ96SW2 442 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 CFHR5Q9BXR6 569 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 DCTPP1Q9H773 170 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 PI4KBQ9UBF8 816 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 SAP30BPQ9UHR5 308 aaKnown RBP11.73□□□□□ -0.53
CTSA-205ENST00000419493 ZHX2Q9Y6X8 837 aa11.73□□□□□ -0.53
CTSA-205ENST00000419493 MYO5AQ9Y4I1 1855 aaKnown RBP11.72□□□□□ -0.53
CTSA-205ENST00000419493 RFX7Q2KHR2 1363 aa11.72□□□□□ -0.53
CTSA-205ENST00000419493 ATRNL1Q5VV63 1379 aa11.72□□□□□ -0.53
CTSA-205ENST00000419493 FLT1P17948 1338 aa11.72□□□□□ -0.53
CTSA-205ENST00000419493 PTPRAP18433 802 aa11.72□□□□□ -0.53
CTSA-205ENST00000419493 ATP5JP18859 108 aa11.72□□□□□ -0.53
CTSA-205ENST00000419493 MAP3K10Q02779 954 aa11.72□□□□□ -0.53
CTSA-205ENST00000419493 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
CTSA-205ENST00000419493 EDC3Q96F86 508 aaKnown RBP11.72□□□□□ -0.53
CTSA-205ENST00000419493 PALD1Q9ULE6 856 aa11.72□□□□□ -0.53
CTSA-205ENST00000419493 PCDHB15Q9Y5E8 787 aa11.72□□□□□ -0.53
CTSA-205ENST00000419493 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.53
CTSA-205ENST00000419493 MAGEB6P1A0A0J9YX57 407 aa11.71□□□□□ -0.53
CTSA-205ENST00000419493 BTBD19C9JJ37 291 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms