RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 C1orf216Q8TAB5 229 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 XAGE3Q8WTP9 111 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
HMGN1-205ENST00000419378 TSPAN10Q9H1Z9 355 aaPredicted RBP8.94□□□□□ -0.98
HMGN1-205ENST00000419378 ZNF395Q9H8N7 513 aaPredicted RBP8.94□□□□□ -0.98
HMGN1-205ENST00000419378 CHPF2Q9P2E5 772 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 UBN2Q6ZU65 1347 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 ABCC12Q96J65 1359 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 IBTKQ9P2D0 1353 aaPredicted RBP8.94□□□□□ -0.98
HMGN1-205ENST00000419378 IGFBP4P22692 258 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 GPTP24298 496 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 TLR1Q15399 786 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 TPTE2Q6XPS3 522 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 ARHGAP27Q6ZUM4 889 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 COPS6Q7L5N1 327 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 TAS1R3Q7RTX0 852 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 C8orf58Q8NAV2 365 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 TSR2Q969E8 191 aaKnown RBP8.93□□□□□ -0.98
HMGN1-205ENST00000419378 DBF4Q9UBU7 674 aaPredicted RBP8.93□□□□□ -0.98
HMGN1-205ENST00000419378 HRH3Q9Y5N1 445 aa8.93□□□□□ -0.98
HMGN1-205ENST00000419378 ARFGEF2Q9Y6D5 1785 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 IL16Q14005 1332 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 ELL2O00472 640 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-205ENST00000419378 CAPN5O15484 640 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-205ENST00000419378 C21orf2O43822 256 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 SRGNP10124 158 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 FOXK2Q01167 660 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 AIMP1Q12904 312 aaKnown RBP8.92□□□□□ -0.98
HMGN1-205ENST00000419378 FKBP5Q13451 457 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-205ENST00000419378 MTFR1Q15390 333 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 ZNF34Q8IZ26 560 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 TTLL6Q8N841 843 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 NLRP3Q96P20 1036 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 MKNK1Q9BUB5 465 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 NYXQ9GZU5 481 aa8.92□□□□□ -0.98
HMGN1-205ENST00000419378 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-205ENST00000419378 RIC1Q4ADV7 1423 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 FANCIQ9NVI1 1328 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 KLRG2A4D1S0 409 aaPredicted RBP8.91□□□□□ -0.98
HMGN1-205ENST00000419378 FAM187AA6NFU0 413 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 NTSR2O95665 410 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
HMGN1-205ENST00000419378 SERPINB4P48594 390 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 CENPCQ03188 943 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 SUSD4Q5VX71 490 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 STYK1Q6J9G0 422 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 CAPN12Q6ZSI9 719 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 SLC9A9Q8IVB4 645 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 ZNF622Q969S3 477 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMGN1-205ENST00000419378 MASTLQ96GX5 879 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 USP3Q9Y6I4 520 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 CACNA1SQ13698 1873 aa8.91□□□□□ -0.98
HMGN1-205ENST00000419378 SLX4Q8IY92 1834 aa8.9□□□□□ -0.98
HMGN1-205ENST00000419378 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-205ENST00000419378 RASSF7Q02833 373 aa8.9□□□□□ -0.98
HMGN1-205ENST00000419378 PARP10Q53GL7 1025 aa8.9□□□□□ -0.98
HMGN1-205ENST00000419378 HSP90AB3PQ58FF7 597 aa8.9□□□□□ -0.98
HMGN1-205ENST00000419378 PRPF40BQ6NWY9 871 aaKnown RBP8.9□□□□□ -0.98
HMGN1-205ENST00000419378 WDR63Q8IWG1 891 aa8.9□□□□□ -0.98
HMGN1-205ENST00000419378 TSPYL6Q8N831 410 aa8.9□□□□□ -0.98
HMGN1-205ENST00000419378 PLBD2Q8NHP8 589 aa8.9□□□□□ -0.98
HMGN1-205ENST00000419378 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
HMGN1-205ENST00000419378 HYPKQ9NX55 129 aa8.9□□□□□ -0.98
HMGN1-205ENST00000419378 RNF123Q5XPI4 1314 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 CDK2AP1O14519 115 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 NPR1P16066 1061 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 TCIRG1Q13488 830 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 CRY2Q49AN0 593 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 NLRP10Q86W26 655 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 SEPT3Q9UH03 358 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 IQSEC3Q9UPP2 1182 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-205ENST00000419378 SBF1O95248 1867 aa8.89□□□□□ -0.99
HMGN1-205ENST00000419378 FER1L6Q2WGJ9 1857 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 CCER2I3L3R5 266 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 NFKBIEO00221 500 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 TWISTNBQ3B726 338 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-205ENST00000419378 CCDC30Q5VVM6 783 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 PPP1R42Q7Z4L9 355 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 ZNF526Q8TF50 670 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-205ENST00000419378 INSM2Q96T92 566 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-205ENST00000419378 UTP14AQ9BVJ6 771 aaKnown RBP8.88□□□□□ -0.99
HMGN1-205ENST00000419378 CHMP4AQ9BY43 222 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 PHAXQ9H814 394 aaKnown RBP8.88□□□□□ -0.99
HMGN1-205ENST00000419378 RNF181Q9P0P0 153 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 MTMR7Q9Y216 660 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 TIAM2Q8IVF5 1701 aa8.88□□□□□ -0.99
HMGN1-205ENST00000419378 ZNF521Q96K83 1311 aa8.87□□□□□ -0.99
HMGN1-205ENST00000419378 UPP2O95045 317 aa8.87□□□□□ -0.99
HMGN1-205ENST00000419378 PRELPP51888 382 aa8.87□□□□□ -0.99
HMGN1-205ENST00000419378 NAA30Q147X3 362 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-205ENST00000419378 TMCO4Q5TGY1 634 aa8.87□□□□□ -0.99
HMGN1-205ENST00000419378 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
HMGN1-205ENST00000419378 ZNF428Q96B54 188 aa8.87□□□□□ -0.99
HMGN1-205ENST00000419378 ZSCAN10Q96SZ4 725 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-205ENST00000419378 ISCA1Q9BUE6 129 aa8.87□□□□□ -0.99
HMGN1-205ENST00000419378 LAMB2P55268 1798 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 SH3TC1Q8TE82 1336 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms