RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PDE4BQ07343 736 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 SLC39A14Q15043 492 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 MCMDC2Q4G0Z9 681 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 OTUD7BQ6GQQ9 843 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 ATRIPQ8WXE1 791 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 C8orf76Q96K31 380 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 RAI14Q9P0K7 980 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 RASGRP2Q7LDG7 609 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 METTL16Q86W50 562 aaKnown RBP9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 SLC35F6Q8N357 371 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 PRPF38AQ8NAV1 312 aaKnown RBP9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 CEMIPQ8WUJ3 1361 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 BMP6P22004 513 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 CDC27P30260 824 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 IRAK1P51617 712 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 TRDNQ13061 729 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 SKIDA1Q1XH10 827 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 HSP90AA4PQ58FG1 418 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 TTLL5Q6EMB2 1281 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 STAG1Q8WVM7 1258 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 NAPGQ99747 312 aaPredicted RBP9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 KDM3BQ7LBC6 1761 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 ATP5JP18859 108 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 SATB1Q01826 763 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 MAP9Q49MG5 647 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 FOXP4Q8IVH2 680 aaPredicted RBP9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 TEX13AQ9BXU3 409 aaPredicted RBP9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 KAT14Q9H8E8 782 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 NFE2L3Q9Y4A8 694 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 C21orf2O43822 256 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 INPP5BP32019 993 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 NR1I3Q14994 352 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 SHC4Q6S5L8 630 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 COG1Q8WTW3 980 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 KAZALD1Q96I82 304 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 PCDHA5Q9Y5H7 936 aa9.13□□□□□ -0.95
HMGXB4-202ENST00000418170 MST1RQ04912 1400 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 MCM3P25205 808 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 MARCKSP29966 332 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 TDO2P48775 406 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 EIF4A1P60842 406 aaKnown RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 CCDC148Q8NFR7 591 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 ACEP12821 1306 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 SLIT3O75094 1523 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 KIF28PB7ZC32 967 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 DDR1Q08345 913 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 FAM76AQ8TAV0 307 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 ENOX1Q8TC92 643 aaKnown RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 MYO1AQ9UBC5 1043 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 TTF2Q9UNY4 1162 aaKnown RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 ATXN2Q99700 1313 aaKnown RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 CCDC189A1A4V9 331 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 PPP6R2O75170 966 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 CHGBP05060 677 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 SETQ01105 290 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 AMPD2Q01433 879 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 KIF23Q02241 960 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 TEFQ10587 303 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 STIM1Q13586 685 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 NUTM2AQ8IVF1 878 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 FBXL16Q8N461 479 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 RIN2Q8WYP3 895 aaPredicted RBP9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 SHANK3Q9BYB0 1731 aa9.12□□□□□ -0.95
HMGXB4-202ENST00000418170 A0A1B0GTH6 734 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 ANXA1P04083 346 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 AMPHP49418 695 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 USP14P54578 494 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 SUCLG2Q96I99 432 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 CABS1Q96KC9 395 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 CDC5LQ99459 802 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 MAP3K2Q9Y2U5 619 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 ANKARQ7Z5J8 1434 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 MYH8P13535 1937 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 UTYO14607 1347 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 SH3TC1Q8TE82 1336 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 E7EWF7 191 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 GPTP24298 496 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 GGCXP38435 758 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 FMR1Q06787 632 aaKnown RBP eCLIP9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 RESP18Q5W5W9 173 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 CCDC102BQ68D86 513 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 GBP6Q6ZN66 633 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 JMYQ8N9B5 988 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 GNL3LQ9NVN8 582 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 MYO6Q9UM54 1294 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 LMTK3Q96Q04 1460 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 SHTN1A0MZ66 631 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 PPFIA1Q13136 1202 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 CWF19L2Q2TBE0 894 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 LONRF3Q496Y0 759 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 ELOA2Q8IYF1 753 aaPredicted RBP9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 BCAS4Q8TDM0 211 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 ANKRD24Q8TF21 1146 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 GRIN2DO15399 1336 aa9.11□□□□□ -0.95
HMGXB4-202ENST00000418170 KDM6AO15550 1401 aaPredicted RBP9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 GOLGA6CA6NDK9 693 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 AGPSO00116 658 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 GRM8O00222 908 aa9.1□□□□□ -0.95
HMGXB4-202ENST00000418170 EIF3HO15372 352 aaKnown RBP eCLIP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms