RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 RPS6KA4O75676 772 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 NMIQ13287 307 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-204ENST00000417762 TAF7LQ5H9L4 462 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 LDHAL6AQ6ZMR3 332 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.21□□□□□ -0.94
SHPRH-204ENST00000417762 GPKOWQ92917 476 aaPredicted RBP eCLIP9.21□□□□□ -0.94
SHPRH-204ENST00000417762 KCNB2Q92953 911 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-204ENST00000417762 FSD1Q9BTV5 496 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 SLC24A3Q9HC58 644 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 ZNF652Q9Y2D9 606 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 ZNF609O15014 1411 aa9.21□□□□□ -0.94
SHPRH-204ENST00000417762 COL5A3P25940 1745 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-204ENST00000417762 NTSR2O95665 410 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 HSP90B1P14625 803 aaKnown RBP9.2□□□□□ -0.94
SHPRH-204ENST00000417762 NEK4P51957 841 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 KCNQ4P56696 695 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 PTH1RQ03431 593 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 FAM182BQ5T319 152 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 SEPT12Q8IYM1 358 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 MAP4K1Q92918 833 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 EDC3Q96F86 508 aaKnown RBP9.2□□□□□ -0.94
SHPRH-204ENST00000417762 FAM227BQ96M60 508 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 QTRT2Q9H974 415 aaKnown RBP9.2□□□□□ -0.94
SHPRH-204ENST00000417762 NIP7Q9Y221 180 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHPRH-204ENST00000417762 SNX14Q9Y5W7 946 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 RFX7Q2KHR2 1363 aa9.2□□□□□ -0.94
SHPRH-204ENST00000417762 A0A0D9SFI3 127 aa9.19□□□□□ -0.94
SHPRH-204ENST00000417762 FRAT2O75474 233 aaPredicted RBP9.19□□□□□ -0.94
SHPRH-204ENST00000417762 HCLS1P14317 486 aaPredicted RBP9.19□□□□□ -0.94
SHPRH-204ENST00000417762 MCM2P49736 904 aa9.19□□□□□ -0.94
SHPRH-204ENST00000417762 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
SHPRH-204ENST00000417762 NECTIN1Q15223 517 aa9.19□□□□□ -0.94
SHPRH-204ENST00000417762 KBTBD3Q8NAB2 608 aa9.19□□□□□ -0.94
SHPRH-204ENST00000417762 XAGE2Q96GT9 111 aa9.19□□□□□ -0.94
SHPRH-204ENST00000417762 DNAJC2Q99543 621 aaKnown RBP9.19□□□□□ -0.94
SHPRH-204ENST00000417762 CNNM1Q9NRU3 951 aa9.19□□□□□ -0.94
SHPRH-204ENST00000417762 CCDC171Q6TFL3 1326 aa9.19□□□□□ -0.94
SHPRH-204ENST00000417762 FAM177BA6PVY3 158 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 IFIT1P09914 478 aaKnown RBP9.18□□□□□ -0.94
SHPRH-204ENST00000417762 ADORA1P30542 326 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.94
SHPRH-204ENST00000417762 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 METTL24Q5JXM2 366 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 CCDC158Q5M9N0 1113 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 NHSQ6T4R5 1651 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 VGLL2Q8N8G2 317 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 RTL9Q8NET4 1388 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 PAG1Q9NWQ8 432 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 NARFQ9UHQ1 456 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 CCNL1Q9UK58 526 aaPredicted RBP9.18□□□□□ -0.94
SHPRH-204ENST00000417762 MED23Q9ULK4 1368 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 NDUFB9Q9Y6M9 179 aa9.18□□□□□ -0.94
SHPRH-204ENST00000417762 BTAF1O14981 1849 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 RIC1Q4ADV7 1423 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 MROH5Q6ZUA9 1318 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 GOLIM4O00461 696 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 TAF5LO75529 589 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 PDE8BO95263 885 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 HSP90AA1P07900 732 aaKnown RBP9.17□□□□□ -0.94
SHPRH-204ENST00000417762 ATP2B3Q16720 1220 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 CCDC152Q4G0S7 254 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 MCMDC2Q4G0Z9 681 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 SLC10A5Q5PT55 438 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 TTC39AQ5SRH9 613 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 GORABQ5T7V8 394 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 ZNF512BQ96KM6 892 aaPredicted RBP9.17□□□□□ -0.94
SHPRH-204ENST00000417762 TM6SF1Q9BZW5 370 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 CWC22Q9HCG8 908 aaKnown RBP9.17□□□□□ -0.94
SHPRH-204ENST00000417762 HELLSQ9NRZ9 838 aa9.17□□□□□ -0.94
SHPRH-204ENST00000417762 RBM8AQ9Y5S9 174 aaKnown RBP9.17□□□□□ -0.94
SHPRH-204ENST00000417762 ABCC12Q96J65 1359 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 MYH3P11055 1940 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 FGFR2P21802 821 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 SSFA2P28290 1259 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 CUL4AQ13619 759 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 RAB3GAP1Q15042 981 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 SF3B3Q15393 1217 aaKnown RBP9.16□□□□□ -0.94
SHPRH-204ENST00000417762 TSGA10IPQ3SY00 556 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 ZMYM1Q5SVZ6 1142 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 USPL1Q5W0Q7 1092 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 TBC1D9BQ66K14 1250 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 CREB3L3Q68CJ9 461 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 PRPF40BQ6NWY9 871 aaKnown RBP9.16□□□□□ -0.94
SHPRH-204ENST00000417762 SMIM5Q71RC9 77 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 DDX46Q7L014 1031 aaKnown RBP9.16□□□□□ -0.94
SHPRH-204ENST00000417762 ZNF589Q86UQ0 364 aaPredicted RBP9.16□□□□□ -0.94
SHPRH-204ENST00000417762 TMX3Q96JJ7 454 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 TTC14Q96N46 770 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 UPF3BQ9BZI7 483 aaKnown RBP9.16□□□□□ -0.94
SHPRH-204ENST00000417762 SEC31BQ9NQW1 1179 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
SHPRH-204ENST00000417762 RTCBQ9Y3I0 505 aaKnown RBP9.16□□□□□ -0.94
SHPRH-204ENST00000417762 BCORQ6W2J9 1755 aa9.15□□□□□ -0.94
SHPRH-204ENST00000417762 SLC27A2O14975 620 aa9.15□□□□□ -0.94
SHPRH-204ENST00000417762 RNF113AO15541 343 aaKnown RBP9.15□□□□□ -0.94
SHPRH-204ENST00000417762 KCNMA1Q12791 1236 aa9.15□□□□□ -0.94
SHPRH-204ENST00000417762 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms