RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 PTPRCP08575 1304 aa9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 TNPO2O14787 897 aaKnown RBP9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SEMA3EO15041 775 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 CTNND1O60716 968 aaKnown RBP9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ENTPD3O75355 529 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 INHAP05111 366 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ELNP15502 786 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PTPRAP18433 802 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PRDX5P30044 214 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ZSCAN29Q8IWY8 852 aaPredicted RBP9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ZFPM1Q8IX07 1006 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ZGPATQ8N5A5 531 aaKnown RBP9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 MRPL50Q8N5N7 158 aaKnown RBP9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 COA7Q96BR5 231 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 DEFB118Q96PH6 123 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 CEP126Q9P2H0 1117 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 FBXO3Q9UK99 471 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 DENND2AQ9ULE3 1009 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 LRRFIP2Q9Y608 721 aaKnown RBP9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SALL1Q9NSC2 1324 aa9.81□□□□□ -0.84
HLA-DPA1-241ENST00000417724 MYH2Q9UKX2 1941 aa9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 RFX5P48382 616 aaPredicted RBP9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 RGS3P49796 1198 aa9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 MAP3K10Q02779 954 aa9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ATP2B3Q16720 1220 aa9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ATG9AQ7Z3C6 839 aa9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SLF2Q8IX21 1173 aa9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 IDI2Q9BXS1 227 aa9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 STAP2Q9UGK3 403 aa9.8□□□□□ -0.84
HLA-DPA1-241ENST00000417724 TRIM75PA6NK02 468 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ANP32CO43423 234 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 CIAO1O76071 339 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 NECAB2Q7Z6G3 386 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PAWRQ96IZ0 340 aaKnown RBP9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PAK6Q9NQU5 681 aaPredicted RBP9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 TAOK2Q9UL54 1235 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PTPRFP10586 1907 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 DOCK2Q92608 1830 aa9.79□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ATRNL1Q5VV63 1379 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ZBTB22O15209 634 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 BMP8BP34820 402 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SPTY2D1Q68D10 685 aaPredicted RBP9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SH3BP5LQ7L8J4 393 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 DZIP1Q86YF9 867 aaKnown RBP9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ANKRD13CQ8N6S4 541 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 FAM163AQ96GL9 167 aaPredicted RBP9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SIL1Q9H173 461 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 AGTPBP1Q9UPW5 1226 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 HDAC5Q9UQL6 1122 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SZT2Q5T011 3432 aa9.78□□□□□ -0.84
HLA-DPA1-241ENST00000417724 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.84
HLA-DPA1-241ENST00000417724 DDTLA6NHG4 134 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 SOX1O00570 391 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 TBC1D12O60347 775 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 UBTFL1P0CB47 393 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 IL15P40933 162 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 PHKA1P46020 1223 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 GCLCP48506 637 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 PABPC4Q13310 644 aaKnown RBP eCLIP9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 FAM110CQ1W6H9 321 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 FAM9BQ8IZU0 186 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 PROCA1Q8NCQ7 364 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 SSH1Q8WYL5 1049 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 LRCH3Q96II8 777 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ABCF2Q9UG63 623 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 GAKO14976 1311 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 PHIPQ8WWQ0 1821 aa9.77□□□□□ -0.85
HLA-DPA1-241ENST00000417724 DOCK1Q14185 1865 aa9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 NPM3O75607 178 aaKnown RBP9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 HMGCRP04035 888 aa9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 PICALMQ13492 652 aa9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 CCDC102BQ68D86 513 aa9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 GDF15Q99988 308 aa9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 NBPF3Q9H094 633 aa9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 RPTORQ8N122 1335 aa9.76□□□□□ -0.85
HLA-DPA1-241ENST00000417724 GPR75-ASB3A0A0A6YYF3 556 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 MAP4K4O95819 1239 aaPredicted RBP9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 LDHCP07864 332 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 BTDP43251 543 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 MNX1P50219 401 aaPredicted RBP9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 SPP2Q13103 211 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 TREML2Q5T2D2 321 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 C7orf61Q8IZ16 206 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 OSBPL5Q9H0X9 879 aaPredicted RBP9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 DDX4Q9NQI0 724 aaKnown RBP9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ALPK3Q96L96 1907 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 PDS5AQ29RF7 1337 aaKnown RBP9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 ZNF521Q96K83 1311 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 RFX7Q2KHR2 1363 aa9.75□□□□□ -0.85
HLA-DPA1-241ENST00000417724 CUL9Q8IWT3 2517 aa9.74□□□□□ -0.85
HLA-DPA1-241ENST00000417724 E9PSI1 815 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms