RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NCOA5Q9HCD5 579 aaKnown RBP19.68■□□□□ 0.74
SSBP3-205ENST00000417664 MSL1Q68DK7 614 aa19.67■□□□□ 0.74
SSBP3-205ENST00000417664 CTR9Q6PD62 1173 aa19.67■□□□□ 0.74
SSBP3-205ENST00000417664 SYNE3Q6ZMZ3 975 aa19.67■□□□□ 0.74
SSBP3-205ENST00000417664 DDX11Q96FC9 970 aa19.67■□□□□ 0.74
SSBP3-205ENST00000417664 FAM163AQ96GL9 167 aaPredicted RBP19.67■□□□□ 0.74
SSBP3-205ENST00000417664 GPR101Q96P66 508 aaPredicted RBP19.67■□□□□ 0.74
SSBP3-205ENST00000417664 EYA3Q99504 573 aa19.67■□□□□ 0.74
SSBP3-205ENST00000417664 ZC3H12CQ9C0D7 883 aaKnown RBP19.67■□□□□ 0.74
SSBP3-205ENST00000417664 NID2Q14112 1375 aa19.66■□□□□ 0.74
SSBP3-205ENST00000417664 METAP2P50579 478 aaKnown RBP eCLIP19.66■□□□□ 0.741e-6■■■□□ 15.4
SSBP3-205ENST00000417664 KRT85P78386 507 aa19.66■□□□□ 0.74
SSBP3-205ENST00000417664 DPP8Q6V1X1 898 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-205ENST00000417664 USP48Q86UV5 1035 aa19.66■□□□□ 0.74
SSBP3-205ENST00000417664 TOMM22Q9NS69 142 aa19.66■□□□□ 0.74
SSBP3-205ENST00000417664 TACC3Q9Y6A5 838 aa19.66■□□□□ 0.74
SSBP3-205ENST00000417664 MROH7-TTC4A0A0A0MT08 1334 aa19.66■□□□□ 0.74
SSBP3-205ENST00000417664 COL11A2P13942 1736 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-205ENST00000417664 CCDC69A6NI79 296 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 USP17L12C9JPN9 530 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 USP17L21D6R901 530 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 ZBTB43O43298 467 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 PLCG2P16885 1265 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 L1TD1Q5T7N2 865 aaKnown RBP19.65■□□□□ 0.74
SSBP3-205ENST00000417664 NFXL1Q6ZNB6 911 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 C2CD5Q86YS7 1000 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 SLC12A7Q9Y666 1083 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 ORC4O43929 436 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 WTAPQ15007 396 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 PPP2R5BQ15173 497 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 RRP12Q5JTH9 1297 aaKnown RBP19.65■□□□□ 0.74
SSBP3-205ENST00000417664 MFSD14BQ5SR56 506 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 GPT2Q8TD30 523 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 CNKSR1Q969H4 720 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 CHAMP1Q96JM3 812 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 UBAC1Q9BSL1 405 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 JAG2Q9Y219 1238 aa19.65■□□□□ 0.74
SSBP3-205ENST00000417664 UBE2HP62256 183 aa19.64■□□□□ 0.73
SSBP3-205ENST00000417664 DNM1Q05193 864 aaKnown RBP19.64■□□□□ 0.73
SSBP3-205ENST00000417664 ZNF622Q969S3 477 aaKnown RBP eCLIP19.64■□□□□ 0.73
SSBP3-205ENST00000417664 SCAND2PQ9GZW5 306 aaPredicted RBP19.64■□□□□ 0.73
SSBP3-205ENST00000417664 INCENPQ9NQS7 918 aa19.64■□□□□ 0.73
SSBP3-205ENST00000417664 CNPY2Q9Y2B0 182 aa19.64■□□□□ 0.73
SSBP3-205ENST00000417664 TCHHQ07283 1943 aa19.64■□□□□ 0.73
SSBP3-205ENST00000417664 FSD2A1L4K1 749 aa19.63■□□□□ 0.73
SSBP3-205ENST00000417664 GOLGA6L3A6NEY3 463 aa19.63■□□□□ 0.73
SSBP3-205ENST00000417664 FOXD4L6Q3SYB3 417 aaPredicted RBP19.63■□□□□ 0.73
SSBP3-205ENST00000417664 ATL3Q6DD88 541 aa19.63■□□□□ 0.73
SSBP3-205ENST00000417664 FOXD4L3Q6VB84 417 aaPredicted RBP19.63■□□□□ 0.73
SSBP3-205ENST00000417664 IQCA1Q86XH1 822 aa19.63■□□□□ 0.73
SSBP3-205ENST00000417664 AMOTL1Q8IY63 956 aa19.63■□□□□ 0.73
SSBP3-205ENST00000417664 NKX2-3Q8TAU0 364 aa19.63■□□□□ 0.73
SSBP3-205ENST00000417664 SYAP1Q96A49 352 aaPredicted RBP19.63■□□□□ 0.73
SSBP3-205ENST00000417664 MKRN1Q9UHC7 482 aaKnown RBP19.63■□□□□ 0.73
SSBP3-205ENST00000417664 ELP1O95163 1332 aa19.63■□□□□ 0.73
SSBP3-205ENST00000417664 BAZ2AQ9UIF9 1905 aaKnown RBP19.63■□□□□ 0.73
SSBP3-205ENST00000417664 GPR75-ASB3A0A0A6YYF3 556 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 CCDC196A0A1B0GTZ2 297 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 FDPSP14324 419 aaKnown RBP19.62■□□□□ 0.73
SSBP3-205ENST00000417664 PDE4BQ07343 736 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 RESTQ13127 1097 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 CC2D2BQ6DHV5 1058 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 SLC16A10Q8TF71 515 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 RTFDC1Q9BY42 306 aaPredicted RBP19.62■□□□□ 0.73
SSBP3-205ENST00000417664 ORC3Q9UBD5 711 aaPredicted RBP19.62■□□□□ 0.73
SSBP3-205ENST00000417664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.62■□□□□ 0.736e-6■■□□□ 13.9
SSBP3-205ENST00000417664 LAMB1P07942 1786 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 DTNBO60941 627 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 USP5P45974 858 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 CAVIN1Q6NZI2 390 aaKnown RBP19.62■□□□□ 0.73
SSBP3-205ENST00000417664 FERMT3Q86UX7 667 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 GAKO14976 1311 aa19.62■□□□□ 0.73
SSBP3-205ENST00000417664 GOLGA8AA7E2F4 631 aa19.61■□□□□ 0.73
SSBP3-205ENST00000417664 ZNF445P59923 1031 aa19.61■□□□□ 0.73
SSBP3-205ENST00000417664 KLHL34Q8N239 644 aa19.61■□□□□ 0.73
SSBP3-205ENST00000417664 MCM9Q9NXL9 1143 aa19.61■□□□□ 0.73
SSBP3-205ENST00000417664 CFAP45Q9UL16 551 aa19.61■□□□□ 0.73
SSBP3-205ENST00000417664 MYH2Q9UKX2 1941 aa19.61■□□□□ 0.73
SSBP3-205ENST00000417664 STK36Q9NRP7 1315 aa19.6■□□□□ 0.73
SSBP3-205ENST00000417664 SEC23AQ15436 765 aa19.6■□□□□ 0.73
SSBP3-205ENST00000417664 DIXDC1Q155Q3 683 aa19.6■□□□□ 0.73
SSBP3-205ENST00000417664 GRIK5Q16478 980 aa19.6■□□□□ 0.73
SSBP3-205ENST00000417664 GRIPAP1Q4V328 841 aa19.6■□□□□ 0.73
SSBP3-205ENST00000417664 PODNQ7Z5L7 613 aa19.6■□□□□ 0.73
SSBP3-205ENST00000417664 MICU3Q86XE3 530 aa19.6■□□□□ 0.73
SSBP3-205ENST00000417664 ZSCAN10Q96SZ4 725 aaPredicted RBP19.6■□□□□ 0.73
SSBP3-205ENST00000417664 GDPD2Q9HCC8 539 aa19.6■□□□□ 0.73
SSBP3-205ENST00000417664 ROBO3Q96MS0 1386 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 TNKSO95271 1327 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 RIMBP2O15034 1052 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 FIBPO43427 364 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 GTF2IP78347 998 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 C12orf60Q5U649 245 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 SH3RF3Q8TEJ3 882 aaPredicted RBP19.59■□□□□ 0.73
SSBP3-205ENST00000417664 C8orf76Q96K31 380 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 G3V3G9 751 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 RANBP6O60518 1105 aaKnown RBP19.59■□□□□ 0.73
SSBP3-205ENST00000417664 ADD1P35611 737 aaKnown RBP19.59■□□□□ 0.73
SSBP3-205ENST00000417664 BTDP43251 543 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 NTRK3Q16288 839 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms