RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 KAT14Q9H8E8 782 aa7.29□□□□□ -1.24
CCNT1-202ENST00000417344 CDC23Q9UJX2 597 aa7.29□□□□□ -1.24
CCNT1-202ENST00000417344 CCDC9Q9Y3X0 531 aaKnown RBP7.29□□□□□ -1.24
CCNT1-202ENST00000417344 SYCP2Q9BX26 1530 aa7.29□□□□□ -1.24
CCNT1-202ENST00000417344 SOS1Q07889 1333 aaPredicted RBP7.29□□□□□ -1.24
CCNT1-202ENST00000417344 CLSTN1O94985 981 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 IPO7O95373 1038 aaKnown RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 MAP4K4O95819 1239 aaPredicted RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 GNAI2P04899 355 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 RHOXF2BP0C7M4 288 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 CLNS1AP54105 237 aaKnown RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 ATP2B2Q01814 1243 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 KIF4BQ2VIQ3 1234 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 PRPF40BQ6NWY9 871 aaKnown RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 RSBN1LQ6PCB5 846 aaPredicted RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 OTUD6BQ8N6M0 293 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 PUS7Q96PZ0 661 aaKnown RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 BAG1Q99933 345 aaPredicted RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 RHOXF2Q9BQY4 288 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 KLC4Q9NSK0 619 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 SPG7Q9UQ90 795 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 NEURL4Q96JN8 1562 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 EIF3HO15372 352 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 CBFA2T2O43439 604 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 KIAA0754O94854 1291 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 TOP1P11387 765 aaKnown RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 CEBPZQ03701 1054 aaKnown RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 GOLGA8FQ08AF8 430 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 GOLGA8DPQ0D2H9 430 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 TUBB2AQ13885 445 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 NCAPHQ15003 741 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 CDC42BPGQ6DT37 1551 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 TOGARAM2Q6ZUX3 1019 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 RIC3Q7Z5B4 369 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 CCDC26Q8TAB7 109 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 FAM76AQ8TAV0 307 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 TUBB2BQ9BVA1 445 aa7.28□□□□□ -1.24
CCNT1-202ENST00000417344 NUCKS1Q9H1E3 243 aaKnown RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 TARBP1Q13395 1621 aaKnown RBP7.28□□□□□ -1.24
CCNT1-202ENST00000417344 ABCA8O94911 1581 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 VWDEQ8N2E2 1590 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CPSF1Q10570 1443 aaKnown RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 RAB11FIP3O75154 756 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 MYBL2P10244 700 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 ZKSCAN1P17029 563 aaPredicted RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 GCKP35557 465 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 ARHGAP25P42331 645 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 RWDD2BP57060 319 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 UBASH3AP57075 661 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 PPFIA1Q13136 1202 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 ANKRD1Q15327 319 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CEP85LQ5SZL2 805 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 WDR93Q6P2C0 686 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 B4GALNT4Q76KP1 1039 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 SPATS2Q86XZ4 545 aaKnown RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 VSTM4Q8IW00 320 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CNTROBQ8N137 903 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 KCTD12Q96CX2 325 aaKnown RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 FMNL2Q96PY5 1086 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 SDF4Q9BRK5 362 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CAPS2Q9BXY5 557 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CPSF2Q9P2I0 782 aaKnown RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 RCOR1Q9UKL0 485 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 HPCAL4Q9UM19 191 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 ABCA9Q8IUA7 1624 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 ADGRB1O14514 1584 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 FRMD3A2A2Y4 597 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CTAGE15A4D2H0 777 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 EME2A4GXA9 379 aaPredicted RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 H3BQV1 296 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 IKBKBO14920 756 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 MEFVO15553 781 aaPredicted RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 STX10O60499 249 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 SERPINC1P01008 464 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CTAGE8P0CG41 777 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 ATP1A3P13637 1013 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 LMOD1P29536 600 aaPredicted RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 SMTNP53814 917 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 FUT2Q10981 343 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 OS9Q13438 667 aaPredicted RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 KARSQ15046 597 aaKnown RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CFAP100Q494V2 611 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 IFFO2Q5TF58 517 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 PRPF38BQ5VTL8 546 aaKnown RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CTAGE6Q86UF2 777 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 CTAGE4Q8IX94 777 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 FSIP1Q8NA03 581 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 PI4K2BQ8TCG2 481 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 DDX54Q8TDD1 881 aaKnown RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 DDX20Q9UHI6 824 aaKnown RBP7.27□□□□□ -1.25
CCNT1-202ENST00000417344 ATP10BO94823 1461 aa7.27□□□□□ -1.25
CCNT1-202ENST00000417344 GRIN2DO15399 1336 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 RIMS2Q9UQ26 1411 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 PNMA6EA0A0J9YXQ4 647 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 GOLGA6CA6NDK9 693 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 MOXD2PA6NHM9 499 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 CAND2O75155 1236 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 RASSF9O75901 435 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 GOLGA6DP0CG33 693 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms