RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SWAP70Q9UH65 585 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 CHMP2AO43633 222 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 SEPT6Q14141 434 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 LMNTD2Q8IXW0 634 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 ARMT1Q9H993 441 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 KCNJ14Q9UNX9 436 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 NDC80O14777 642 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 ALDH1L1O75891 902 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 LIG3P49916 1009 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 GSTO1P78417 241 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 PAK1Q13153 545 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.255e-11■□□□□ 10.4
UBR4-205ENST00000417040 MTUS1Q9ULD2 1270 aa13.48□□□□□ -0.25
UBR4-205ENST00000417040 TXNDC9O14530 226 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
UBR4-205ENST00000417040 PSMD6Q15008 389 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 MAEAQ7L5Y9 396 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 CABS1Q96KC9 395 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 RAD51AP2Q09MP3 1159 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 DYMQ7RTS9 669 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 IFT74Q96LB3 600 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 IMPACTQ9P2X3 320 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 NRBP1Q9UHY1 535 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 TNFAIP3P21580 790 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 HSPA1LP34931 641 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 RPUSD2Q8IZ73 545 aaKnown RBP13.47□□□□□ -0.25
UBR4-205ENST00000417040 ANKRD42Q8N9B4 389 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 TCHPQ9BT92 498 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 AGTPBP1Q9UPW5 1226 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 MAP2K2P36507 400 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 PDE1CQ14123 709 aaPredicted RBP13.47□□□□□ -0.25
UBR4-205ENST00000417040 RASA3Q14644 834 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 FMNL3Q8IVF7 1028 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 NELFBQ8WX92 580 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 MAK16Q9BXY0 300 aaKnown RBP13.47□□□□□ -0.25
UBR4-205ENST00000417040 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.47□□□□□ -0.25
UBR4-205ENST00000417040 PABPN1LA6NDY0 278 aaKnown RBP13.47□□□□□ -0.25
UBR4-205ENST00000417040 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
UBR4-205ENST00000417040 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
UBR4-205ENST00000417040 EIF6P56537 245 aaKnown RBP13.46□□□□□ -0.25
UBR4-205ENST00000417040 ZNF594Q96JF6 807 aaPredicted RBP13.46□□□□□ -0.25
UBR4-205ENST00000417040 NOX5Q96PH1 765 aa13.46□□□□□ -0.25
UBR4-205ENST00000417040 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.25
UBR4-205ENST00000417040 TXNDC16Q9P2K2 825 aa13.46□□□□□ -0.25
UBR4-205ENST00000417040 POSTNQ15063 836 aa13.46□□□□□ -0.25
UBR4-205ENST00000417040 NBPF6Q5VWK0 638 aa13.46□□□□□ -0.25
UBR4-205ENST00000417040 FYB2Q5VWT5 728 aa13.46□□□□□ -0.25
UBR4-205ENST00000417040 NBPF5PQ86XG9 351 aaPredicted RBP13.46□□□□□ -0.25
UBR4-205ENST00000417040 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.46□□□□□ -0.25
UBR4-205ENST00000417040 NBPF4Q96M43 638 aa13.46□□□□□ -0.25
UBR4-205ENST00000417040 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.46□□□□□ -0.25
UBR4-205ENST00000417040 FAM169AQ9Y6X4 670 aa13.46□□□□□ -0.25
UBR4-205ENST00000417040 EXOC5O00471 708 aa13.46□□□□□ -0.26
UBR4-205ENST00000417040 HARSP12081 509 aaKnown RBP13.46□□□□□ -0.26
UBR4-205ENST00000417040 ME3Q16798 604 aa13.46□□□□□ -0.26
UBR4-205ENST00000417040 GPCPD1Q9NPB8 672 aa13.46□□□□□ -0.26
UBR4-205ENST00000417040 CALML3P27482 149 aa13.46□□□□□ -0.26
UBR4-205ENST00000417040 TXKP42681 527 aa13.46□□□□□ -0.26
UBR4-205ENST00000417040 SSX2IPQ9Y2D8 614 aa13.46□□□□□ -0.26
UBR4-205ENST00000417040 V9GY48 417 aaPredicted RBP13.46□□□□□ -0.26
UBR4-205ENST00000417040 ATP2A2P16615 1042 aaKnown RBP13.45□□□□□ -0.26
UBR4-205ENST00000417040 CACNA2D3Q8IZS8 1091 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
UBR4-205ENST00000417040 ZMYM4Q5VZL5 1548 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 VSIG1Q86XK7 387 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 TBC1D31Q96DN5 1066 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 HELLSQ9NRZ9 838 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
UBR4-205ENST00000417040 EPB41P11171 864 aaKnown RBP13.45□□□□□ -0.26
UBR4-205ENST00000417040 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
UBR4-205ENST00000417040 GNAQP50148 359 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 CEP120Q8N960 986 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 MCUR1Q96AQ8 359 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 RIPOR2Q9Y4F9 1068 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
UBR4-205ENST00000417040 BUB1O43683 1085 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 NELFCDQ8IXH7 590 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 CCDC170Q8IYT3 715 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 SERTAD1Q9UHV2 236 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 KIAA1524Q8TCG1 905 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 ATP5DP30049 168 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 TRIM14Q14142 442 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 LRRC8AQ8IWT6 810 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 SMC1BQ8NDV3 1235 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 MYO1AQ9UBC5 1043 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 ADGRL1O94910 1474 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 ARHGAP6O43182 974 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 TUBBP07437 444 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 ATP6V1AP38606 617 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
UBR4-205ENST00000417040 IMPG2Q9BZV3 1241 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 FRMD4BQ9Y2L6 1034 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms