RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 DAAM2Q86T65 1068 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 C11orf74Q86VG3 221 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 FCHSD1Q86WN1 690 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 BRSK2Q8IWQ3 736 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 FAM186BQ8IYM0 893 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 AHI1Q8N157 1196 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 NKAIN3Q8N8D7 197 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 NUP133Q8WUM0 1156 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 CHMP7Q8WUX9 453 aaPredicted RBP3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 SYMPKQ92797 1274 aaKnown RBP3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 TATDN2Q93075 761 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 ATP6V1E2Q96A05 226 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 SHDQ96IW2 340 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 TMEM87BQ96K49 555 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 TMEM74Q96NL1 305 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 YIPF4Q9BSR8 244 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 AP1M1Q9BXS5 423 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 OSBPL7Q9BZF2 842 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 PDGFDQ9GZP0 370 aaPredicted RBP3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 GTF2IRD1Q9UHL9 959 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 PFDN2Q9UHV9 154 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 MKL2Q9ULH7 1088 aa3.72□□□□□ -1.81
CTDSPL-203ENST00000416688 hCG_1642624A0A1W2PR95 340 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 PSDA5PKW4 1024 aaPredicted RBP3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 IQCA1LA6NCM1 817 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 GSG1L2A8MUP6 293 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 GOLGA6L22H0YM25 854 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 J3KRW8 73 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 ARHGAP33O14559 1287 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 OPLAHO14841 1288 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 DDX3YO15523 660 aaKnown RBP3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 BRINP1O60477 761 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 ABLIM3O94929 683 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 BAG2O95816 211 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 MYCP01106 439 aaPredicted RBP3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 IDEP14735 1019 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 KCNA2P16389 499 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 RXRGP48443 463 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 HDGFP51858 240 aaKnown RBP3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 AK2P54819 239 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 FUT2Q10981 343 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 TCIRG1Q13488 830 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 LAMC2Q13753 1193 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 HSP90AB3PQ58FF7 597 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 COX20Q5RI15 118 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 DMRTA1Q5VZB9 504 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 LVRNQ6Q4G3 990 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 SKAP1Q86WV1 359 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 NBPF5PQ86XG9 351 aaPredicted RBP3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 PPM1KQ8N3J5 372 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 ZNF454Q8N9F8 522 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 ADAM32Q8TC27 787 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 USP33Q8TEY7 942 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 CCT6BQ92526 530 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 NKD1Q969G9 470 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 PPM1MQ96MI6 270 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 KIF2CQ99661 725 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 MYD88Q99836 296 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 ARHGAP9Q9BRR9 750 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 RHOBTB2Q9BYZ6 727 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 UNC45AQ9H3U1 944 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 HELLSQ9NRZ9 838 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 KLHL11Q9NVR0 708 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 PPP4R2Q9NY27 417 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 ZMYM5Q9UJ78 669 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 TSKSQ9UJT2 592 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 MAFFQ9ULX9 164 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 DMTF1Q9Y222 760 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 PHLDB1Q86UU1 1377 aa3.71□□□□□ -1.82
CTDSPL-203ENST00000416688 SMTNL1A8MU46 457 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 F5H423 210 aaPredicted RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 CPLX1O14810 134 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 PRPF3O43395 683 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 HRO43593 1189 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 TMCC2O75069 709 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 DDAH1O94760 285 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 EYA4O95677 639 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 AGR2O95994 175 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 F12P00748 615 aaPredicted RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 PDGFAP04085 211 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ARAFP10398 606 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 GSTT1P30711 240 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 CASQ1P31415 396 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 CTNNA1P35221 906 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 CAP2P40123 477 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 IREB2P48200 963 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 GIPRP48546 466 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 TDO2P48775 406 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 PSEN2P49810 448 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ZBED6P86452 979 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 PLIN5Q00G26 463 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ADCY1Q08828 1119 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 KIAA2012Q0VF49 1180 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 GTF2H3Q13889 308 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 TRIM29Q14134 588 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 GBX1Q14549 363 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 FNDC3BQ53EP0 1204 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms