RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 TFIP11Q9UBB9 837 aaKnown RBP8.81□□□□□ -1
THUMPD3-202ENST00000416603 MKRN1Q9UHC7 482 aaKnown RBP8.81□□□□□ -1
THUMPD3-202ENST00000416603 KIAA1024Q9UPX6 916 aa8.81□□□□□ -1
THUMPD3-202ENST00000416603 MAFBQ9Y5Q3 323 aaPredicted RBP8.81□□□□□ -1
THUMPD3-202ENST00000416603 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
THUMPD3-202ENST00000416603 BTBD11A6QL63 1104 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 NFKBIEO00221 500 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 C21orf2O43822 256 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 A1BGP04217 495 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 MSX1P28360 303 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 PDE6BP35913 854 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 IL6STP40189 918 aaPredicted RBP8.8□□□□□ -1
THUMPD3-202ENST00000416603 PRELPP51888 382 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 CLDN10P78369 228 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 PRR5LQ6MZQ0 368 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 OGFOD1Q8N543 542 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 DNAJC5GQ8N7S2 189 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 KLRG1Q96E93 195 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 CCDC97Q96F63 343 aaPredicted RBP8.8□□□□□ -1
THUMPD3-202ENST00000416603 RUBCNLQ9H714 662 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 DNAAF2Q9NVR5 837 aaKnown RBP8.8□□□□□ -1
THUMPD3-202ENST00000416603 USP3Q9Y6I4 520 aa8.8□□□□□ -1
THUMPD3-202ENST00000416603 CEMIPQ8WUJ3 1361 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 GLTPD2A6NH11 291 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 KCNQ3O43525 872 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 VEGFAP15692 232 aaPredicted RBP8.79□□□□□ -1
THUMPD3-202ENST00000416603 PIP4K2AP48426 406 aaPredicted RBP8.79□□□□□ -1
THUMPD3-202ENST00000416603 ST5P78524 1137 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 GAS6Q14393 721 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 CCDC102BQ68D86 513 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 PGBD3Q8N328 593 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 CNBD1Q8NA66 436 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 TRERF1Q96PN7 1200 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 SETDB2Q96T68 719 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 BRIP1Q9BX63 1249 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 PPP1R12CQ9BZL4 782 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
THUMPD3-202ENST00000416603 NUDCQ9Y266 331 aa8.79□□□□□ -1
THUMPD3-202ENST00000416603 KDM3BQ7LBC6 1761 aa8.78□□□□□ -1
THUMPD3-202ENST00000416603 CDK2AP1O14519 115 aa8.78□□□□□ -1
THUMPD3-202ENST00000416603 ZBTB7BO15156 539 aaPredicted RBP8.78□□□□□ -1
THUMPD3-202ENST00000416603 CAMTA2O94983 1202 aa8.78□□□□□ -1
THUMPD3-202ENST00000416603 U2AF1L5P0DN76 240 aaPredicted RBP8.78□□□□□ -1
THUMPD3-202ENST00000416603 U2AF1Q01081 240 aaKnown RBP eCLIP8.78□□□□□ -1
THUMPD3-202ENST00000416603 RTF1Q92541 710 aaKnown RBP8.78□□□□□ -1
THUMPD3-202ENST00000416603 ZNF428Q96B54 188 aa8.78□□□□□ -1
THUMPD3-202ENST00000416603 ZNF594Q96JF6 807 aaPredicted RBP8.78□□□□□ -1
THUMPD3-202ENST00000416603 PHACTR3Q96KR7 559 aa8.78□□□□□ -1
THUMPD3-202ENST00000416603 NUP98P52948 1817 aa8.77□□□□□ -1
THUMPD3-202ENST00000416603 THBS1P07996 1170 aa8.77□□□□□ -1.01
THUMPD3-202ENST00000416603 CDK11BP21127 795 aaKnown RBP8.77□□□□□ -1.01
THUMPD3-202ENST00000416603 MCM10Q7L590 875 aa8.77□□□□□ -1.01
THUMPD3-202ENST00000416603 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
THUMPD3-202ENST00000416603 RETREG2Q8NC44 543 aa8.77□□□□□ -1.01
THUMPD3-202ENST00000416603 AIDAQ96BJ3 306 aa8.77□□□□□ -1.01
THUMPD3-202ENST00000416603 TAOK3Q9H2K8 898 aa8.77□□□□□ -1.01
THUMPD3-202ENST00000416603 SCN4AP35499 1836 aa8.77□□□□□ -1.01
THUMPD3-202ENST00000416603 PRAMEF22A3QJZ6 481 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 FAM177BA6PVY3 158 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 E9PSI1 815 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 RASA1P20936 1047 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 EFHC2Q5JST6 749 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 PRPF40BQ6NWY9 871 aaKnown RBP8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 NBPF5PQ86XG9 351 aaPredicted RBP8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 ZNF295-AS1Q8N0V1 137 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 MBIPQ9NS73 344 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 SCHIP1Q9P0W5 487 aaPredicted RBP8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 RBM19Q9Y4C8 960 aaKnown RBP8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 USP16Q9Y5T5 823 aa8.76□□□□□ -1.01
THUMPD3-202ENST00000416603 EIF5BO60841 1220 aaKnown RBP8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 SNRPA1P09661 255 aaKnown RBP8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 SRGNP10124 158 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 ATP4AP20648 1035 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 EPHA4P54764 986 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 DCTN1Q14203 1278 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 SOGA3Q5TF21 947 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 STYK1Q6J9G0 422 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 TNS4Q8IZW8 715 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 SIX5Q8N196 739 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 JMYQ8N9B5 988 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 MASTLQ96GX5 879 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 LTBP3Q9NS15 1303 aa8.75□□□□□ -1.01
THUMPD3-202ENST00000416603 DDNO94850 711 aaPredicted RBP8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 NEFMP07197 916 aa8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 SLURP2P0DP57 97 aa8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 LMOD1P29536 600 aaPredicted RBP8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 CCDC93Q567U6 631 aa8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 TBCELQ5QJ74 424 aa8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 SLC9A9Q8IVB4 645 aa8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 SVOPQ8N4V2 548 aa8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 C1orf216Q8TAB5 229 aa8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 CRISPLD1Q9H336 500 aa8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 NIP7Q9Y221 180 aaKnown RBP eCLIP8.74□□□□□ -1.01
THUMPD3-202ENST00000416603 SFI1A8K8P3 1242 aa8.73□□□□□ -1.01
THUMPD3-202ENST00000416603 HSPA1AP0DMV8 641 aaKnown RBP8.73□□□□□ -1.01
THUMPD3-202ENST00000416603 HSPA1BP0DMV9 641 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms